1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TTTCATTCCGGCTGTATGATCTCAAGCAGCAAGGCTACATTGAGAGACAAGAGgtatggaactgtggataatactgctgttaaaggttttttacatggtaggagttagcttttaggtacagtggtcgacctaaatatgttatcattaaaatct...
species | Zea mays |
transcript | GRMZM2G007555_T01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CGGCTGTATGATCTCAAGCAGCAAGGCTACATTGAGAGACAAGAG GTTAAGCAGATGGTTGTTGCTACACTTGCTGAGTCAGGAAEST: gi|149111971|gb|EE191131.2|EE191131
genomic: CGGCTGTATGATCTCAAGCAGCAAGGCTACATTGAGAGACAAGAGgtatggaact ... tggttttcagGTTAAGCAGATGGTTGTTGCTACACTTGCTGAGTCAGGAA
EST: CATTCCGGCTGTATGATCTCAAGCAGCAAGGCTACATTGAGAGACAAGAG GTTAAGCAGATGGTTGTTGCTACACTTGCTGAGTCAGGAATGAATCTTTCAEST: gi|149077489|gb|EE166185.2|EE166185
genomic: CATTCCGGCTGTATGATCTCAAGCAGCAAGGCTACATTGAGAGACAAGAGgtatggaact ... tggttttcagGTTAAGCAGATGGTTGTTGCTACACTTGCTGAGTCAGGAATGAATCTTTCA
EST: CATTCCGGCTGTATGATCTCAAGCAGCAAGGCTACATTGAGAGACAAGAG GTTAAGCAGATGGTTGTTGCTACACTTGCTGAGTCAGGAATEST: gi|71319028|gb|DR796259.1|DR796259
genomic: CATTCCGGCTGTATGATCTCAAGCAGCAAGGCTACATTGAGAGACAAGAGgtatggaact ... tggttttcagGTTAAGCAGATGGTTGTTGCTACACTTGCTGAGTCAGGAAT
EST: CATTCCGGCTGTATGATCTCAAGCAGCAAGGCTACATTGAGAGACAAGAG GTTAAGCAGATGGTTGTTGCTACACTTGCTGAGTCAGGAATGAATCTTTCAEST: gi|148944608|gb|EC889738.2|EC889738
genomic: CATTCCGGCTGTATGATCTCAAGCAGCAAGGCTACATTGAGAGACAAGAGgtatggaact ... tggttttcagGTTAAGCAGATGGTTGTTGCTACACTTGCTGAGTCAGGAATGAATCTTTCA
EST: CATTCCGGCTGTATGATCTCAAGCAGCAAGGCTACATTGAGAGACAAGAG GTTAAGCAGATGGTTGTTGCTACACTTGCTGAGTCAGGAATGAATCTTTCA
genomic: CATTCCGGCTGTATGATCTCAAGCAGCAAGGCTACATTGAGAGACAAGAGgtatggaact ... tggttttcagGTTAAGCAGATGGTTGTTGCTACACTTGCTGAGTCAGGAATGAATCTTTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTCATTCCGGCTGTATGATCTCAAGCAGCAAGGCTACATTGAGAGACAAGAGgtatggaactgtggataatactgctgttaaaggttttttacatggtaggagttagcttttaggtacagtggtcgacctaaatatgttatcattaaaatct
- - - - - - - - - - - - - AGCAAG