1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
ATTTCAGGCGGCTGGAGGCATACGATGGCACTTACATCAGAGGGAAAGCTTTACGGATGGGGATGGAACAAGgtcgttatcatcatctctgtgtgcctctacttgctttggtacccaattattggtgtctaattcaaaccgcacatgcaaaattctatcaatgtactacttt...
species | Zea mays |
transcript | GRMZM2G003565_T03 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CGATGGCACTTACATCAGAGGGAAAGCTTTACGGATGGGGATGGAACAAG TTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAAEST: gi|194716840|gb|FK933999.1|FK933999
genomic: CGATGGCACTTACATCAGAGGGAAAGCTTTACGGATGGGGATGGAACAAGgtcgttatca ... gatcctccagTTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAA
EST: CGATGGCACTTACATCAGAGGGAGAGCTTTACGGATGGGGATGGAACAAG TTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAAEST: gi|76919945|gb|DV167932.1|DV167932
genomic: CGATGGCACTTACATCAGAGGGAAAGCTTTACGGATGGGGATGGAACAAGgtcgttatca ... gatcctccagTTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAA
EST: CGATGGCACTTACATCAGAGGGGAAGCTTTACGGATGGGGATGGAACAAG TTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAAEST: gi|60342864|gb|DN209837.1|DN209837
genomic: CGATGGCACTTACATCAGAGGGAAAGCTTTACGGATGGGGATGGAACAAGgtcgttatca ... gatcctccagTTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAA
EST: GGGAAAGCTTTACGGATGGGGATGGAACAAG TTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAAEST: gi|211471127|gb|FL255671.1|FL255671
genomic: GGGAAAGCTTTACGGATGGGGATGGAACAAGgtcgttatca ... gatcctccagTTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAA
EST: CGATGGCACTTACATCAGAGGGAAAGCTTTACGGATGGGGATGGAACAAG TTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAAEST: gi|211476174|gb|FL255694.1|FL255694
genomic: CGATGGCACTTACATCAGAGGGAAAGCTTTACGGATGGGGATGGAACAAGgtcgttatca ... gatcctccagTTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAA
EST: CGATGGCACTTACATCAGAGGGAAAGCTTTACGGATGGGGATGGAACAAG TTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAAEST: gi|60339276|gb|DN206249.1|DN206249
genomic: CGATGGCACTTACATCAGAGGGAAAGCTTTACGGATGGGGATGGAACAAGgtcgttatca ... gatcctccagTTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAA
EST: GGGAAAGCTTTACGGATGGGGATGGAACAAG TTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAAEST: gi|29130842|gb|CB381546.1|CB381546
genomic: GGGAAAGCTTTACGGATGGGGATGGAACAAGgtcgttatca ... gatcctccagTTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAA
EST: CGATGGCACTTACATCAGAGGGAAAGCTTTACGGATGGGGATGGAACAAG TTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAAEST: gi|76283808|gb|DV023376.1|DV023376
genomic: CGATGGCACTTACATCAGAGGGAAAGCTTTACGGATGGGGATGGAACAAGgtcgttatca ... gatcctccagTTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAA
EST: CGATGGCACTTACATCAGAGGGAAAGCTTTACGGATGGGGATGGAACAAG TTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAA
genomic: CGATGGCACTTACATCAGAGGGAAAGCTTTACGGATGGGGATGGAACAAGgtcgttatca ... gatcctccagTTCGGACAAGTCGGAGTCGGCAACAACGACGACCACAGCTCCCCCGGACAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTTCAGGCGGCTGGAGGCATACGATGGCACTTACATCAGAGGGAAAGCTTTACGGATGGGGATGGAACAAGgtcgttatcatcatctctgtgtgcctctacttgctttggtacccaattattggtgtctaattcaaaccgcacatgcaaaattctatcaatgtactacttt
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