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GACCAACTGTGGCTCCTGAAAACTCAGTTGCTTCTGCTGCTCTGGAACAACTCAGTGCCGCAGAAGTGGAGAGACGGGTTAAACTGTTGCGAGAAGACAGgtaatgtgggattatttgatatatacagactatttcttttggtctcagaaaaaatgaaattctggtgatagttcactattacgggcacaaatttgacctg...
species | Zea mays |
transcript | GRMZM5G870572_T03 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CTCAGTGCCGCAGAAGTGGAGAGACGGGTTAAACTGTTGCGAGAAGACAG CGAATTGCAGAAATTACATAAGAAGTTTGTTCTTGGAAATATTCTGCAAGAEST: gi|211184532|gb|FL153187.1|FL153187
genomic: CTCAGTGCCGCAGAAGTGGAGAGACGGGTTAAACTGTTGCGAGAAGACAGgtaatgtggg ... ccctttacagCGAATTGCAGAAATTACATAAGAAGTTTGTTCTTGGAAATATTCTGCAAGA
EST: CTCAGTGCCGCAGAAGTGGAGAGACGGGTTAAACTGTTGCGAGAAGACAG CGAATTGCAGAAACTACATAAGAAGTTTGTTCTTGGAAATATTCTGCAAGAEST: gi|211184538|gb|FL153193.1|FL153193
genomic: CTCAGTGCCGCAGAAGTGGAGAGACGGGTTAAACTGTTGCGAGAAGACAGgtaatgtggg ... ccctttacagCGAATTGCAGAAATTACATAAGAAGTTTGTTCTTGGAAATATTCTGCAAGA
EST: TCAGTGCCGCAGAAGTGGAGAGACGGGGTTAAACTGTTGCGAGAAGACAG CGAATTGCAGAAACTACATEST: gi|31356392|gb|CD440749.1|CD440749
genomic: TCAGTGCCGCAGAAGTGGAGAGACGGG-TTAAACTGTTGCGAGAAGACAGgtaatgtggg ... ccctttacagCGAATTGCAGAAATTACAT
EST: CTCAGTGCCGCAGAAGTGGAGAGACGGGTTAAACTGTTGCGAGAAGACAG CGAATTGCAGAAACTACATAAGAAGTTTGTTCTTGGAAATATTCTGCAAGAEST: gi|13150541|gb|BG320863.1|BG320863
genomic: CTCAGTGCCGCAGAAGTGGAGAGACGGGTTAAACTGTTGCGAGAAGACAGgtaatgtggg ... ccctttacagCGAATTGCAGAAATTACATAAGAAGTTTGTTCTTGGAAATATTCTGCAAGA
EST: CTCAGTGCCGCAGAAGTGGAGANACGGGTTAAACTGTTGCGAGAAGACAG CGAATTGCAGAAATTACATAAGAAGTTTGTTCTTGGAAATATTCTGCAAGA
genomic: CTCAGTGCCGCAGAAGTGGAGAGACGGGTTAAACTGTTGCGAGAAGACAGgtaatgtggg ... ccctttacagCGAATTGCAGAAATTACATAAGAAGTTTGTTCTTGGAAATATTCTGCAAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACCAACTGTGGCTCCTGAAAACTCAGTTGCTTCTGCTGCTCTGGAACAACTCAGTGCCGCAGAAGTGGAGAGACGGGTTAAACTGTTGCGAGAAGACAGgtaatgtgggattatttgatatatacagactatttcttttggtctcagaaaaaatgaaattctggtgatagttcactattacgggcacaaatttgacctg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA