1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ATGGTTTGGCGAGGAAGATGTACCTCTGCAATAGTAATGCCTAGTAATTGAAAGTACAGGCATTGTAATTCTTCAGATCCAGACTTGCAGCAGTTTTTATgtaatttactgaaactaaacccagaaacacaaggataaaattctgcaatatctatgcacctctgaaggagcatgtattttttttgtgtatgcctgtatgg...
species | Zea mays |
transcript | GRMZM5G819212_T05 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AAAGTACAGGCATTGTAATTCTTCAGATCCAGACTTGCAGCAGTTTTTAT GAACAATTGTAGTTAAGGAGTTCAAGGGAAGACTGTATTCTTGCAGAGTTTEST: gi|78022966|gb|DV491353.1|DV491353
genomic: AAAGTACAGGCATTGTAATTCTTCAGATCCAGACTTGCAGCAGTTTTTATgtaatttact ... tgcattgtagGAACAATTGTAGTTAAGGAGTTCAAGGGAAGACTGTATTCTTGCAGAGTTT
EST: AAAGTACAGGCATTGTAATTCTTCAGATCCAGACTTGCAGCAGTTTTTAT GAACAATTGTAGTTAAGGAGTTCAAGGGAAGACTGTATTCTTGCAGAGTTT
genomic: AAAGTACAGGCATTGTAATTCTTCAGATCCAGACTTGCAGCAGTTTTTATgtaatttact ... tgcattgtagGAACAATTGTAGTTAAGGAGTTCAAGGGAAGACTGTATTCTTGCAGAGTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGGTTTGGCGAGGAAGATGTACCTCTGCAATAGTAATGCCTAGTAATTGAAAGTACAGGCATTGTAATTCTTCAGATCCAGACTTGCAGCAGTTTTTATgtaatttactgaaactaaacccagaaacacaaggataaaattctgcaatatctatgcacctctgaaggagcatgtattttttttgtgtatgcctgtatgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaacacaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggataaaa