1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
GCGATGACCCTGCTCTTATCCTTTACACAAGTGGCACAACTGGTAAACCTAAAGGAGTAGTTCACACCCATGAGGGCATTCTTTCTCAGgtgcattttcatctttaagtagatatatacatgattcgataaattgttgagcgctgtacagaagccagaaggtattttttatgtatagttgattctattt...
species | Zea mays |
transcript | GRMZM2G460078_T02 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CTGGTAAACCTAAAGGAGTAGTTCACACCCATGAGGGCATTCTTTCTCAG GTTCAGATTCTATCTGAAGCGTGGGGATATCGAAGTGAAGACCAATTTCTGEST: gi|32867327|gb|CF007009.1|CF007009
genomic: CTGGTAAACCTAAAGGAGTAGTTCACACCCATGAGGGCATTCTTTCTCAGgtgcattttc ... gatttggcagGTTCAGATTCTATCTGAAGCGTGGGGATATCGAAGTGAAGACCAATTTCTG
EST: GAGGGCATTCTTTCTCAG GTTCAGATTCTATCTGAAGCGTGGGGATATCGAAGTGAAGACCAATTTCTGEST: gi|14529467|gb|BI096600.1|BI096600
genomic: GAGGGCATTCTTTCTCAGgtgcattttc ... gatttggcagGTTCAGATTCTATCTGAAGCGTGGGGATATCGAAGTGAAGACCAATTTCTG
EST: ATTCTTTCTCAG GTTCAGATTCTATCTGAAGCGTGGGGATATCGAAGTGAAGACCAATTTCTGEST: gi|93012882|gb|EB638402.1|EB638402
genomic: ATTCTTTCTCAGgtgcattttc ... gatttggcagGTTCAGATTCTATCTGAAGCGTGGGGATATCGAAGTGAAGACCAATTTCTG
EST: CTGGTAAACCTAAAGGAGTAGTTCACACCCATGAGGGCATTCTTTCTCAG GTTCAGATTCTATCTGAAGCGTGGGGATATCGAAGTGAAGACCAATTTCTGEST: gi|24766847|gb|CA401979.1|CA401979
genomic: CTGGTAAACCTAAAGGAGTAGTTCACACCCATGAGGGCATTCTTTCTCAGgtgcattttc ... gatttggcagGTTCAGATTCTATCTGAAGCGTGGGGATATCGAAGTGAAGACCAATTTCTG
EST: CTGGTAAACCTAAAGGAGTAGTTCACACCCATGAGGGCATTCTTTCTCAG GTTCAGATTCTATCTGEST: gi|76925597|gb|DV170498.1|DV170498
genomic: CTGGTAAACCTAAAGGAGTAGTTCACACCCATGAGGGCATTCTTTCTCAGgtgcattttc ... gatttggcagGTTCAGATTCTATCTG
EST: CTGGTAAACCTAAAGGAGTAGTTCACACCCATGAGGGCATTCTTTCTCAG GTTCAGATTCTATCTGAAGCGTGGGGATATCGAAGTGAAGACCAATTTCTG
genomic: CTGGTAAACCTAAAGGAGTAGTTCACACCCATGAGGGCATTCTTTCTCAGgtgcattttc ... gatttggcagGTTCAGATTCTATCTGAAGCGTGGGGATATCGAAGTGAAGACCAATTTCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGATGACCCTGCTCTTATCCTTTACACAAGTGGCACAACTGGTAAACCTAAAGGAGTAGTTCACACCCATGAGGGCATTCTTTCTCAGgtgcattttcatctttaagtagatatatacatgattcgataaattgttgagcgctgtacagaagccagaaggtattttttatgtatagttgattctattt
- - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG