1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GGATGGTTACCTGGATTGAAAGGAGAGGGTGATAGTGAACAGCTTCCGACTATTGCCATAGTTGCAAACTATGACACCTTCGGTGCTGCACCTgtatgtttatccaaaaagtgttccgtaatgttctctaatgttcttgtagatgtctccgataacgtggattttctcag
species | Zea mays |
transcript | GRMZM2G451366_T01 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TTCCGACTATTGCCATAGTTGCAAACTATGACACCTTCGGTGCTGCACCT GCACTTTCTCTGGGAAGCGACAGCAATGGAAGTGGAGTTGTGGCTCTTCTAEST: gi|211532947|gb|FL381078.1|FL381078
genomic: TTCCGACTATTGCCATAGTTGCAAACTATGACACCTTCGGTGCTGCACCTgtatgtttat ... attttctcagGCACTTTCTCTGGGAAGCGACAGCAATGGAAGTGGAGTTGTGGCTCTTCTA
EST: CTATGACACCTTCGGTGCTGCACCT GCACTTTCTCTGGGAAGCGACAGCAATGGAAGTGGAGTTGTGGCTCTTCTAEST: gi|60339357|gb|DN206330.1|DN206330
genomic: CTATGACACCTTCGGTGCTGCACCTgtatgtttat ... attttctcagGCACTTTCTCTGGGAAGCGACAGCAATGGAAGTGGAGTTGTGGCTCTTCTA
EST: TTCCGACTATTGCCATAGTTGCAAACTATGACACCTTCGGTGCTGCACCT GCACTTTCTCTGGGAAGCGACAGCAATGGAAGTGGAGTTGTGGCTCTTCTAEST: gi|32921841|gb|CF026653.1|CF026653
genomic: TTCCGACTATTGCCATAGTTGCAAACTATGACACCTTCGGTGCTGCACCTgtatgtttat ... attttctcagGCACTTTCTCTGGGAAGCGACAGCAATGGAAGTGGAGTTGTGGCTCTTCTA
EST: TTCCGACTATTGCCATAGTTGCAAACTATGACACCTTTGGTGCTGCACCT GCACTTTCTGTGGGAAGCGACAGCAATGGAAGTGGAGTTGTGGCTCTTCTAEST: gi|71440389|gb|DR821439.1|DR821439
genomic: TTCCGACTATTGCCATAGTTGCAAACTATGACACCTTCGGTGCTGCACCTgtatgtttat ... attttctcagGCACTTTCTCTGGGAAGCGACAGCAATGGAAGTGGAGTTGTGGCTCTTCTA
EST: TTCCGACTATTGCCATAGTTGCAAACTATGACACCTTCCGTGCTGCACCT GCACTTTCTCTGGEST: gi|61119699|gb|DN560660.1|DN560660
genomic: TTCCGACTATTGCCATAGTTGCAAACTATGACACCTTCGGTGCTGCACCTgtatgtttat ... attttctcagGCACTTTCTCTGG
EST: TTCCGACTATTGCCATAGTTGCAAACTATGACACCTTCGGTGCTGCACCT GCACTTTCTCTGGGAAGCGACAGCAATGGAAGTGGAGTTGTGGCTCTTCTA
genomic: TTCCGACTATTGCCATAGTTGCAAACTATGACACCTTCGGTGCTGCACCTgtatgtttat ... attttctcagGCACTTTCTCTGGGAAGCGACAGCAATGGAAGTGGAGTTGTGGCTCTTCTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGATGGTTACCTGGATTGAAAGGAGAGGGTGATAGTGAACAGCTTCCGACTATTGCCATAGTTGCAAACTATGACACCTTCGGTGCTGCACCTgtatgtttatccaaaaagtgttccgtaatgttctctaatgttcttgtagatgtctccgataacgtggattttctcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC