1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TGGTGGCAAGGTTATTCCAGGTGCAATGGACAGTGCTGTATCGAAACATTTATCGCATGCATATGGATCTTTGGCTGAACAAGTGGCTACTATTGCCCAGgtgtgttctcctttgactccgcactatttatgctaattctgttgtagtaggatggaaaagaaaaataaagatcaaatggtcaattgtcttttcatctgtt...
species | Zea mays |
transcript | GRMZM2G446108_T02 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TATCGCATGCATATGGATCTTTGGCTGAACAAGTGGCTACTATTGCCCAG AACGAAGGCTTGGGAAAGCGCCTTGCTCATGGATACCCATTTTTGGAAGCTEST: gi|148946266|gb|EC891566.2|EC891566
genomic: TATCGCATGCATATGGATCTTTGGCTGAACAAGTGGCTACTATTGCCCAGgtgtgttctc ... atgtttttagAACGAAGGCTTGGGAAAGCGCCTTGCTCATGGATACCCATTTTTGGAAGCT
EST: TATCGCATGCATATGGATCTTTGGCTGAACAAGTGGCTATTATTGCCCAG AACGAAGGCTTGGGAAAGCGCCTTGTTCATGGATACCCATTTTTGGAAGCTEST: gi|71760898|gb|DR958835.1|DR958835
genomic: TATCGCATGCATATGGATCTTTGGCTGAACAAGTGGCTACTATTGCCCAGgtgtgttctc ... atgtttttagAACGAAGGCTTGGGAAAGCGCCTTGCTCATGGATACCCATTTTTGGAAGCT
EST: TATCGCATGCATATGGATCTTTGGCTGAACAAGTGGCTACTATTGCCCAG AACGAAGGCTTGGGAAAGCGCCTTGCTCATGGATACCCATTTTTGGAAGCTEST: gi|211411795|gb|FL441048.1|FL441048
genomic: TATCGCATGCATATGGATCTTTGGCTGAACAAGTGGCTACTATTGCCCAGgtgtgttctc ... atgtttttagAACGAAGGCTTGGGAAAGCGCCTTGCTCATGGATACCCATTTTTGGAAGCT
EST: TATCGCATGCATATGGATCTTTGGCTGAACAAGTGGCTACTATTGCCCAG AACGAAGGCTTGGGAAAGCGCCTTGCTCATGGATACCCATTTTTGGAAGCTEST: gi|37379892|gb|CF626714.1|CF626714
genomic: TATCGCATGCATATGGATCTTTGGCTGAACAAGTGGCTACTATTGCCCAGgtgtgttctc ... atgtttttagAACGAAGGCTTGGGAAAGCGCCTTGCTCATGGATACCCATTTTTGGAAGCT
EST: TATCGCATGCATATGGATCTTTGGCTGAACAAGTGGCTACTATTGCCCAG AACGAAGGCTTGGGAAAGCGCC-TGCTTCATGGATACCCATTTTTGGAAGC
genomic: TATCGCATGCATATGGATCTTTGGCTGAACAAGTGGCTACTATTGCCCAGgtgtgttctc ... atgtttttagAACGAAGGCTTGGGAAAGCGCCTTGC-TCATGGATACCCATTTTTGGAAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGTGGCAAGGTTATTCCAGGTGCAATGGACAGTGCTGTATCGAAACATTTATCGCATGCATATGGATCTTTGGCTGAACAAGTGGCTACTATTGCCCAGgtgtgttctcctttgactccgcactatttatgctaattctgttgtagtaggatggaaaagaaaaataaagatcaaatggtcaattgtcttttcatctgtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaaaaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaataaa