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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CATTTACAAAACTACCCTCAAATCCAAGAGTTTAATAAATGAGgtgaatcaggttgcttaggtatgtatttttatattcatattatttatattactctaaaatatcatgttatttgtaaaataattaaccttcgtaccttacactattttcttag

Basic information

species Zea mays
transcript GRMZM2G416698_T02
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G416698_T01 (Zea mays), 5'ss of exon 5
lower sequence: LOC_Os03g22160.1 (Oryza sativa), 5'ss of exon 12
CATTTACAAAACTACCCTCAAATCCAAGAGTTTAATAAATGAGgtgaatcaggttgcttaggtatg-tatttttatatt---catattattta----tattactctaa--aatatcatgttatttgtaaaataattaaccttcgtaccttacactattttcttag
|||||| |||||| | || || |||||||||| |||||||||| | |||||||||||  ||||||| | ||  ||| |     |  ||   ||    ||| | | |||  |||| | | || | || ||| || |     |   ||   | ||            
CATTTATAAAACTGCGCTGAAGTCCAAGAGTTCAATAAATGAGATAAATCAGGTTGCACAGgtatgattttcctatgtcagataagttgcctagctttatcattttaacgaataacttattctctgaaaagtattgtgtttctatattattcag-----------