1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTGCCGGACGCTGATCTTTGTTGGAGAAAACTCACAGTTCCATGCGGACGCTGTCCACATGACCACAAAGCTGGACCGGAGATACTGCGCTCTAGTCGAGgtaacatacagttcaaaaaacttgatcccttcagtacacacaggagtaaaacggctgatggccaaggtggtttttcgtggccaaaactgtgcag
species | Zea mays |
transcript | GRMZM2G413857_T05 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CTGTCCACATGACCACAAAGCTGGACCGGAGATACTGCGCTCTAGTCGAG GTTCAGGCTTGTGGTTCACTTGTCACAGAAGAGCAGCCCCATGCGATGGTGEST: gi|67023933|gb|CO452682.1|CO452682
genomic: CTGTCCACATGACCACAAAGCTGGACCGGAGATACTGCGCTCTAGTCGAGgtaacataca ... aactgtgcagGTTCAGGCTTGTGGTTCACTTGTCACAGAAGAGCAGCCCCATGCGATGGTG
EST: CTGTCCACATGACCACAAAGCTGGACCGGAGATACTGCGCTCTAGTCGAG GTTCAGGCTTGTGGTTCACTTGTCACAGAAGAGCAGCCCCATGCGATGGTG
genomic: CTGTCCACATGACCACAAAGCTGGACCGGAGATACTGCGCTCTAGTCGAGgtaacataca ... aactgtgcagGTTCAGGCTTGTGGTTCACTTGTCACAGAAGAGCAGCCCCATGCGATGGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGCCGGACGCTGATCTTTGTTGGAGAAAACTCACAGTTCCATGCGGACGCTGTCCACATGACCACAAAGCTGGACCGGAGATACTGCGCTCTAGTCGAGgtaacatacagttcaaaaaacttgatcccttcagtacacacaggagtaaaacggctgatggccaaggtggtttttcgtggccaaaactgtgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT