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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATTCGAGTAAAAATATCCAAATCGAGGCATTTCACGTGTTCAAGgtatgtataagaaccttaacatctttttgtcaacaaaagtttgcttaaactcgtttggttattttacatgtatcacag

Basic information

species Zea mays
transcript GRMZM2G351417_T03
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|60348049|gb|DN215022.1|DN215022
EST:     GATTCGAGTAAAAATATCCAAATCGAGGCATTTCACGTGTTCAAG                         CTGTTTGCTGCGAATAAAAACAAACCACCTGAGGTCGTGAACATACTGGTC
genomic: GATTCGAGTAAAAATATCCAAATCGAGGCATTTCACGTGTTCAAGgtatgtataa ... tgtatcacagCTGTTTGCTGCGAATAAAAACAAACCACCTGAGGTCGTGAACATACTGGTC
EST: gi|60338005|gb|DN204978.1|DN204978
EST:     GATTCGAGTAAAAATATCCAAATCGAGGCATTTCACGTGTTCAAG                         CTGTTTGCTGCGAATAAAAACAAACCACCTGAGGTCGTGAACATACTGGTC
genomic: GATTCGAGTAAAAATATCCAAATCGAGGCATTTCACGTGTTCAAGgtatgtataa ... tgtatcacagCTGTTTGCTGCGAATAAAAACAAACCACCTGAGGTCGTGAACATACTGGTC