1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ACAATGGCATGGATACTTGACGAATACTCAAAGTTCCATGGTTACTCACCTGCTGTTGTGACAGGAAAGCCTGTGgtaagcaactatctatactgcattttcaacatgtatgtgtactgaaaacgatgttttgagatcaaagttgtaaaatgctctgaagatttataaaaggtgg...
species | Zea mays |
transcript | GRMZM2G178415_T03 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ACTCAAAGTTCCATGGTTACTCACCTGCTGTTGTGACAGGAAAGCCTGTG GACCTCGGAGGATCATTGGGAAGAGACGCCGCTACTGGAAGGGGAGTTCTGEST: gi|19436213|gb|BM952623.1|BM952623
genomic: ACTCAAAGTTCCATGGTTACTCACCTGCTGTTGTGACAGGAAAGCCTGTGgtaagcaact ... caatacacagGACCTCGGAGGATCATTGGGAAGAGACGCCGCTACTGGAAGGGGAGTTCTG
EST: ACTCAAAGTTCCATGGTTACTCACCTGCTGTTGTGACAGGAAAGCCTGTG GACCTCGGAGGATCATTGGGAAGAGACGCCGCTACTGGAAGGGGAGTTCTGEST: gi|13125987|gb|BG316662.1|BG316662
genomic: ACTCAAAGTTCCATGGTTACTCACCTGCTGTTGTGACAGGAAAGCCTGTGgtaagcaact ... caatacacagGACCTCGGAGGATCATTGGGAAGAGACGCCGCTACTGGAAGGGGAGTTCTG
EST: ACTCAAAGTTCCATGGTTACTCACCTGCTGTTGTGACAGGAAAGCCTGTG GACCTCGGAGGATCATTGGGAAGAGACGCCGCTACTGGAAGGGGAGTTCTGEST: gi|19351121|gb|BM895653.1|BM895653
genomic: ACTCAAAGTTCCATGGTTACTCACCTGCTGTTGTGACAGGAAAGCCTGTGgtaagcaact ... caatacacagGACCTCGGAGGATCATTGGGAAGAGACGCCGCTACTGGAAGGGGAGTTCTG
EST: ACTCAAAGTTCCATGGTTACTCACCTGCTGTTGTGACAGGAAAGCCTGTG GACCTCGGAGGATCATTGGGAAGAGACGCCGCTACTGGAAGGGGAGTTCTGEST: gi|148934217|gb|EC878238.2|EC878238
genomic: ACTCAAAGTTCCATGGTTACTCACCTGCTGTTGTGACAGGAAAGCCTGTGgtaagcaact ... caatacacagGACCTCGGAGGATCATTGGGAAGAGACGCCGCTACTGGAAGGGGAGTTCTG
EST: ACTCAAAGTTCCATGGTTACTCACCTGCTGTTGTGACAGGAAAGCCTGTG GACCTCGGAGGATCATTGGGAAGAGACGCCGCTACTGGAAGGGGAGTTCTGEST: gi|60357158|gb|DN224131.1|DN224131
genomic: ACTCAAAGTTCCATGGTTACTCACCTGCTGTTGTGACAGGAAAGCCTGTGgtaagcaact ... caatacacagGACCTCGGAGGATCATTGGGAAGAGACGCCGCTACTGGAAGGGGAGTTCTG
EST: ACTCAAAGTTCCATGGTTACTCACCTGCTGTTGTGACAGGAAAGCCTGTG GACCTCGGAGGATCATTGGGAAGAGACGCCGCTACTGGAAGGGGAGTTCTG
genomic: ACTCAAAGTTCCATGGTTACTCACCTGCTGTTGTGACAGGAAAGCCTGTGgtaagcaact ... caatacacagGACCTCGGAGGATCATTGGGAAGAGACGCCGCTACTGGAAGGGGAGTTCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACAATGGCATGGATACTTGACGAATACTCAAAGTTCCATGGTTACTCACCTGCTGTTGTGACAGGAAAGCCTGTGgtaagcaactatctatactgcattttcaacatgtatgtgtactgaaaacgatgttttgagatcaaagttgtaaaatgctctgaagatttataaaaggtgg
- - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT