1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GAAGGGAATTTCAATCCTTCGAAAGATGAAGAGAAGCATGCCTTTCTGCTGCAATTGCTTTTTTGGTTTAAGCAATCATTCAGgtcactgaaacactccgatgccttctttctcagtcattacttcaacaaattttgattgtgtgcatgtgtctaatattgcccatatttcagtgaatcctta...
species | Zea mays |
transcript | GRMZM2G173416_T02 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AAGCATGCCTTTCTGCTGCAATTGCTTTTTTGGTTTAAGCAATCATTCAG ATGGGTTAATGCAGCACCTTGTGACAGCTGTGG-CCGTGAGACATCCAATGEST: gi|166439809|gb|EG291901.1|EG291901
genomic: AAGCATGCCTTTCTGCTGCAATTGCTTTTTTGGTTTAAGCAATCATTCAGgtcactgaaa ... gtttttgcagATGGGTTAATGCAGCACCTTGTGACAGCTGTGGGCCGTGAGACATCCAATG
EST: AAGCATGCCTTTCTGCTGCAATTGCTTTTTTGGTTTAAGCAATCATTCAG ATGGGTTAATGCAG
genomic: AAGCATGCCTTTCTGCTGCAATTGCTTTTTTGGTTTAAGCAATCATTCAGgtcactgaaa ... gtttttgcagATGGGTTAATGCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGGGAATTTCAATCCTTCGAAAGATGAAGAGAAGCATGCCTTTCTGCTGCAATTGCTTTTTTGGTTTAAGCAATCATTCAGgtcactgaaacactccgatgccttctttctcagtcattacttcaacaaattttgattgtgtgcatgtgtctaatattgcccatatttcagtgaatcctta
- - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA