1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GAGAAGGCTCCCTACGTATCTAAGGCCGAGAAGCTGAAGGTTGAGTACACAAAGAAGATGGACGCCTATAACAACAAGCAGgtgcagtatgttctacatctactccactcacgttgcccggcattgcctcggtaattcgtctgtgtgatgtgagtcacgtgtcgtctgtcactgcag
species | Zea mays |
transcript | GRMZM2G162284_T03 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AGCTGAAGGTTGAGTACACAAAGAAGATGGACGCCTATAACAACAAGCAG TCTGGAGGAGGACCCACATTGTCTGGTGATTCTGACAAGTCCAAGTCCGAGEST: gi|31364137|gb|CD448492.1|CD448492
genomic: AGCTGAAGGTTGAGTACACAAAGAAGATGGACGCCTATAACAACAAGCAGgtgcagtatg ... gtcactgcagTCTGGAGGAGGACCCACATTGTCTGGTGATTCTGACAAGTCCAAGTCCGAG
EST: AGCTGAAGGTTGAGTACACAAAGAAGATGGACGCCTATAACAACAAGCAG TCTGGAGGAGGACCCACATTGTCTGGTGATTCTGACAAGTCCAAGTCCGAG
genomic: AGCTGAAGGTTGAGTACACAAAGAAGATGGACGCCTATAACAACAAGCAGgtgcagtatg ... gtcactgcagTCTGGAGGAGGACCCACATTGTCTGGTGATTCTGACAAGTCCAAGTCCGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGAAGGCTCCCTACGTATCTAAGGCCGAGAAGCTGAAGGTTGAGTACACAAAGAAGATGGACGCCTATAACAACAAGCAGgtgcagtatgttctacatctactccactcacgttgcccggcattgcctcggtaattcgtctgtgtgatgtgagtcacgtgtcgtctgtcactgcag
- - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA