1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
CTTTGTTTAATGGTCAGTCTCAAGCAGCAAGGAATATGCGTAGTCCTGACCAACAGGATGCTGCAGAATCTTCTACTGCCAATGATTTCCCTGCTTTGAGgtgtgcttttttacattttcatgtcttttctatctgttatgttcacttaaagattttagcaattaattctttcactctattatataatctatgaatgagt...
species | Zea mays |
transcript | GRMZM2G153138_T01 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TGATTTCCCTGCTTTGAG CATGTCAGAGATTCAGAATGCTCGTGGTATTATGGATGTACTTGCCGAGATEST: gi|87152145|gb|DY396934.1|DY396934
genomic: TGATTTCCCTGCTTTGAGgtgtgctttt ... atattttcagCATGTCAGAGATTCAGAATGCTCGTGGTATTATGGATGTACTTGCCGAGAT
EST: ACAGGATGATGCAGAATCTTCTACTGCCAATGATTTCCCTGC-TTGAAG CATGTCAGAGATTCAGAATGCTCGTGGTATTATGGATGTACTTGCCGAGA
genomic: ACAGGATGCTGCAGAATCTTCTACTGCCAATGATTTCCCTGCTTTG-AGgtgtgctttt ... atattttcagCATGTCAGAGATTCAGAATGCTCGTGGTATTATGGATGTACTTGCCGAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTTGTTTAATGGTCAGTCTCAAGCAGCAAGGAATATGCGTAGTCCTGACCAACAGGATGCTGCAGAATCTTCTACTGCCAATGATTTCCCTGCTTTGAGgtgtgcttttttacattttcatgtcttttctatctgttatgttcacttaaagattttagcaattaattctttcactctattatataatctatgaatgagt
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG