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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGCAAGTGGACGGAGCTCTTCCCTGCCATCGTGTCCAAAGCGCGCACGGTCGACGTCCTCGTGAACGGCATGGGCGGGCGGAGCGAGTCTTTGCTTCTGgtagaacagctgatccatccctcgtgtcgcgctcgcacgggccgtcgtctgccttgatctcaccgctggttcttcgtgcatgttcgtgttgtggcgcggcgcgtgcag

Basic information

species Zea mays
transcript GRMZM2G145690_T02
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|148999587|gb|EE036565.2|EE036565
EST:     TCGACGTCCTCGTGAACGGCATGGGCGGGCGGAGCGAGTCTTTGCTTCTG                         ATGTATGAGGAGCTGCACGTGATGTCGCCGGTCGTCCCGACGCGCGAGTTC
genomic: TCGACGTCCTCGTGAACGGCATGGGCGGGCGGAGCGAGTCTTTGCTTCTGgtagaacagc ... gcgcgtgcagATGTACGAGGAGCTGCACGTGATGTCGCCGGTCGTCCCGACGCGCGAGTTC