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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGAGCGTGATCAGGAAGGCAGGCTTATTACCTTGGAGTTTGATGATTTTTACTTGGTCAATGCTTATGTCCCAAATTCTGGCCGTGGTTTACGTAGACGGgtaaaagctattcttccttcatgttgttagtgttcatattatgttgtactgcaattgcttaggatattgaattttgctctattgcttcttggtcttcaga...

Basic information

species Zea mays
transcript GRMZM2G134072_T02
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G134072_T02 (Zea mays), 5'ss of exon 5
lower sequence: LOC_Os01g58690.1 (Oryza sativa), 5'ss of exon 4
AGAGCGTGATCAGGAAGGCAGGCTTATTACCTTGGAGTTTGATGATTTTTACTTGGTCAATGCTTATGTCCCAAATTCTGGCCGTGGTTTACGTAGACGGgtaaaagctattcttccttcatgttgttagtgtt--catattatgttgtactgcaattgcttaggatattgaattttgctctattgcttcttggtcttcaga
 || | |||||| || |||||| |||||||  |||||||||||| |||||||||||| ||||| ||||| ||||||||||| |||  | ||||||||| ||||| | ||  | ||||    |  | ||| ||||    |||  | || || | ||||||||| |   ||  ||||||| | | |||| | ||| | ||||| 
TGAACATGATCATGAGGGCAGGGTTATTACTCTGGAGTTTGATGGTTTTTACTTGGTAAATGCCTATGTTCCAAATTCTGGTCGTTTTCTACGTAGACTGgtaaga-ctgcttttcccatctagtattactgttgctttatagtattttatttcaattgctttg---atctaattttgttttcttgcattttgattttcag-