1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TGCAGCAGCCTTAGTGCTTATATATTTTGTTGTCCCTCATCATGGACAAACAAACATAATGGTGTACATTGGAGTATGTTCTCTTCTGGGATCACTCACGgtatgtttttctccaagtatatatggatcaagcatgatattttttatgtttgccaacttgaatttcacaaaataccatttttctatctgatagtatgaagctttgcag
species | Zea mays |
transcript | GRMZM2G129268_T01 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CAAACATAATGGTGTACATTGGAGTATGTTCTCTTCTGGGATCACTCACG GTTATGAGTGTAAGAGCTCTTGGAATTGCCTTGAAGCTAACATTGTCAGGAEST: gi|60355925|gb|DN222898.1|DN222898
genomic: CAAACATAATGGTGTACATTGGAGTATGTTCTCTTCTGGGATCACTCACGgtatgttttt ... agctttgcagGTTATGAGTGTAAGAGCTCTTGGAATTGCCTTGAAGCTAACATTGTCAGGA
EST: CAAACATAATGGTGTACATTGGAGTATGTTCTCTTCTGGGATCACTCACG GTTATGAGTGTAAGAGCTCTTGGAATTGCCTTGAAGCTAACATTGTCAGGAEST: gi|60355918|gb|DN222891.1|DN222891
genomic: CAAACATAATGGTGTACATTGGAGTATGTTCTCTTCTGGGATCACTCACGgtatgttttt ... agctttgcagGTTATGAGTGTAAGAGCTCTTGGAATTGCCTTGAAGCTAACATTGTCAGGA
EST: CAAACATAATGGTGTACATTGGAGTATGTTCTCTTCTGGGATCACTCACG GTTATGAGTGTAAGAGCTCTTGGAATTGCCTTGAAGCTAACATTGTCAGGA
genomic: CAAACATAATGGTGTACATTGGAGTATGTTCTCTTCTGGGATCACTCACGgtatgttttt ... agctttgcagGTTATGAGTGTAAGAGCTCTTGGAATTGCCTTGAAGCTAACATTGTCAGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCAGCAGCCTTAGTGCTTATATATTTTGTTGTCCCTCATCATGGACAAACAAACATAATGGTGTACATTGGAGTATGTTCTCTTCTGGGATCACTCACGgtatgtttttctccaagtatatatggatcaagcatgatattttttatgtttgccaacttgaatttcacaaaataccatttttctatctgatagtatgaagctttgcag
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