1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ATGTCGCCGGACTGCAAAACAAGGATGGATCATTTTCTGGCGATATTTGGGGTGAAGTTGACACTAGgtaaaaaccttttatatgttgccactttggacttcccagcataacaacccatgtgagctattagttcaaagtcttgagtttgttgttttttatttctgtatgtag
species | Zea mays |
transcript | GRMZM2G124557_T02 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AACAAGGATGGATCATTTTCTGGCGATATTTGGGGTGAAGTTGACACTAG GTTCTCGTATATTGCCCTATGTGCCTTATCATTACTGCACCGTCTGCATAAEST: gi|88752275|gb|DY536416.1|DY536416
genomic: AACAAGGATGGATCATTTTCTGGCGATATTTGGGGTGAAGTTGACACTAGgtaaaaacct ... ctgtatgtagGTTCTCGTATATTGCCTTATGTACCTTATCATTACTGCACCGTCTGCATAA
EST: AAGGATGGATCATTTTCTGGCGATATTTGGGGTGAAGTTGACACTAG GTTCTCGTATATTGCCTTATGTACCTTATCATTACTGCACCGTCTGCATAA
genomic: AAGGATGGATCATTTTCTGGCGATATTTGGGGTGAAGTTGACACTAGgtaaaaacct ... ctgtatgtagGTTCTCGTATATTGCCTTATGTACCTTATCATTACTGCACCGTCTGCATAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGTCGCCGGACTGCAAAACAAGGATGGATCATTTTCTGGCGATATTTGGGGTGAAGTTGACACTAGgtaaaaaccttttatatgttgccactttggacttcccagcataacaacccatgtgagctattagttcaaagtcttgagtttgttgttttttatttctgtatgtag
- - - - - - - - - - AGGATG
- - - - - - - - - - - GATGGA