1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TTCAAGAGCTCTTTGGCTGTGAGAGCATTCCTATGTCAGGACTATCAGAAATGCTTGGTCACCACTTCATCAAGAAAACATAGCAAATCCTCATTAACTGgtcagtttctggctgtatctcctctttctagtgtcacatttgctgatttctgtctagatattaggtgtaatagtattttccctaaattactttcatgata...
species | Zea mays |
transcript | GRMZM2G124502_T02 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ATGCTTGGTCACCACTTCATCAAGAAAACATAGCAAATCCTCATTAACTG ATCTAGGATTGCAGTGTGGCAGATAGGCCTAACATTACAACATGGTGTTCTEST: gi|74239585|gb|DT647499.1|DT647499
genomic: ATGCTTGGTCACCACTTCATCAAGAAAACATAGCAAATCCTCATTAACTGgtcagtttct ... ttgcgtgcagATCTAGGATTGCAGTGTGGCAGATAGGCCTAACATTACAACATGGTGTTCT
EST: ATGCTTGGTCCCCACTTCATCAAGAAAACATAGCAAATCCTCATTAACTG ATCTAGGATTGCAGTGTGGCAGATAGGCCTAACATTCCAACATGGTGTTCTEST: gi|71422217|gb|DR805651.1|DR805651
genomic: ATGCTTGGTCACCACTTCATCAAGAAAACATAGCAAATCCTCATTAACTGgtcagtttct ... ttgcgtgcagATCTAGGATTGCAGTGTGGCAGATAGGCCTAACATTACAACATGGTGTTCT
EST: ATGCTTGGTCCCCCCTTCATCAAGAAAACATAGCAAATCCTCATTAACTG ATCTAGGATTGCAGTGTGGCAGATAGGCCTACCATTACACCATGGTGTTCT
genomic: ATGCTTGGTCACCACTTCATCAAGAAAACATAGCAAATCCTCATTAACTGgtcagtttct ... ttgcgtgcagATCTAGGATTGCAGTGTGGCAGATAGGCCTAACATTACAACATGGTGTTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCAAGAGCTCTTTGGCTGTGAGAGCATTCCTATGTCAGGACTATCAGAAATGCTTGGTCACCACTTCATCAAGAAAACATAGCAAATCCTCATTAACTGgtcagtttctggctgtatctcctctttctagtgtcacatttgctgatttctgtctagatattaggtgtaatagtattttccctaaattactttcatgata
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