1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CTGGACATCGATTTAGTTTGGTCTGACATAAAGAACTTAAATCTGAAAGgtattgttcttatgtgctaacatattcttttttctggaatacgcaggagaactgcgcatttttgtattaagaagaaagagaataggggaaaggtccccat...
species | Zea mays |
transcript | GRMZM2G113640_T05 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CTGGACATCGATTTAGTTTGGTCTGACATAAAGAACTTAAATCTGAWAG GCGTCCATGTTGATACTGTTGEST: gi|211270651|gb|FL248441.1|FL248441
genomic: CTGGACATCGATTTAGTTTGGTCTGACATAAAGAACTTAAATCTGAAAGgtattgttct ... tttagtgcagGCGTCCATGTTGATACTGTTG
EST: CTGGACATCGATTTAGTTTGGTCTGACATAAAGAACTTAAATCTGAAAG GCGTCCATGTTGATACTGTTGTCATGAATCCTCCCTTTGGTACACGAAGGAEST: gi|211270656|gb|FL248446.1|FL248446
genomic: CTGGACATCGATTTAGTTTGGTCTGACATAAAGAACTTAAATCTGAAAGgtattgttct ... tttagtgcagGCGTCCATGTTGATACTGTTGTCATGAATCCTCCCTTTGGTACACGAAGGA
EST: CTGGACATCGATTTAGTTTGGTCTGACATAAAGAACTTAAATCTGAAAG GCGTCCATGTTGATAC
genomic: CTGGACATCGATTTAGTTTGGTCTGACATAAAGAACTTAAATCTGAAAGgtattgttct ... tttagtgcagGCGTCCATGTTGATAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGGACATCGATTTAGTTTGGTCTGACATAAAGAACTTAAATCTGAAAGgtattgttcttatgtgctaacatattcttttttctggaatacgcaggagaactgcgcatttttgtattaagaagaaagagaataggggaaaggtccccat
- - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - AAGAAC