1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GCTGTTTGTTGGGAATGTGCCCAAGGGGCTGAGCGAGGAGGAGCTTACCAACACTATCAAGGGGAAGGGTCCAGGTGTTATCAACATTGAGATGTTTAAGgtgtgctttgtggtttcgtgcttgttttcgtttgtacaccacaagttccagattcactaatattgagatgctgtttgcacag
species | Zea mays |
transcript | GRMZM2G103430_T02 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GGTGTTATCAACATTGAGATGTTTAAG GATCAGCATGACCCAAACCGTAACCGTGGCTTCCTCTTTGTTGAGTATTACEST: gi|211247169|gb|FL378129.1|FL378129
genomic: GGTGTTATCAACATTGAGATGTTTAAGgtgtgctttg ... gtttgcacagGATCAGCATGACCCAAACCGTAACCGTGGCTTCCTCTTTGTTGAGTATTAC
EST: ACACTATCAANGGGAAGGGTCCAGGTGTTATCAACATTGAGATGTTTAAG GATCAGCATGACCCAAACCGTNAACCGTGGCTTTCCTCTTTGTTTGAGTATEST: gi|28910015|gb|CB331214.1|CB331214
genomic: ACACTATCAAGGGGAAGGGTCCAGGTGTTATCAACATTGAGATGTTTAAGgtgtgctttg ... gtttgcacagGATCAGCATGACCCAAACCGT-AACCGTGGCTT-CCTCTTTGTT-GAGTAT
EST: ACACTATCAAGGGGAAGGGTCCAGGTGTTATCAACATTGAGATGTTTAAG GATCAGCATGACCCAAACCGTAACCGTGGCTTCCTCTTTGTTGAGTATTACEST: gi|211538187|gb|FL238623.1|FL238623
genomic: ACACTATCAAGGGGAAGGGTCCAGGTGTTATCAACATTGAGATGTTTAAGgtgtgctttg ... gtttgcacagGATCAGCATGACCCAAACCGTAACCGTGGCTTCCTCTTTGTTGAGTATTAC
EST: ACACTATCAAGGGGAAGGGTCCAGGTGTTATCAACATTGAGATGTTTAAG GATCAGCATGACCCAAACCGTAACCGTGGCTTCCTCTTTGTTGAGTATTAC
genomic: ACACTATCAAGGGGAAGGGTCCAGGTGTTATCAACATTGAGATGTTTAAGgtgtgctttg ... gtttgcacagGATCAGCATGACCCAAACCGTAACCGTGGCTTCCTCTTTGTTGAGTATTAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTGTTTGTTGGGAATGTGCCCAAGGGGCTGAGCGAGGAGGAGCTTACCAACACTATCAAGGGGAAGGGTCCAGGTGTTATCAACATTGAGATGTTTAAGgtgtgctttgtggtttcgtgcttgttttcgtttgtacaccacaagttccagattcactaatattgagatgctgtttgcacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG