Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTACCAGAGCAGCCTAGGTAACAAGAGGATCGAACTATTCGATACTGGTACCGACCAAGTGGCCGACAAATCTCCAGTTCAAATGGCATCAGgtggtcatcagtagcttttgatatttctaataaattcctcttgaaacatcaggttcagattgttatctttctcattaacgtacgtcgatgattttacag

Basic information

species Zea mays
transcript GRMZM2G102903_T01
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|6021822|gb|AW066750.1|AW066750
EST:     TACTGGTACCGACCAAGTGGCCGACAAATCTCCAGTTCAAATGGCATCAG                         AAATGTCAAATCAAGAGCTCATTAGCGCCGGAAGGAAACAAATGGACCAAA
genomic: TACTGGTACCGACCAAGTGGCCGACAAATCTCCAGTTCAAATGGCATCAGgtggtcatca ... gattttacagAAATGTCAAATCAAGAGCTCATTAGCGCCGGAAGGAAACAAATGGACCAAA
EST: gi|22133523|gb|BQ833759.1|BQ833759
EST:     TACTGGTACCGACCAAGTGGCCGACAAATCTCCAGTTCAAATGGCATCAG                         AAATGTCAAATCAAGAGCTCATTAGCGCCGGAAGGAAACAAATGGACCAAA
genomic: TACTGGTACCGACCAAGTGGCCGACAAATCTCCAGTTCAAATGGCATCAGgtggtcatca ... gattttacagAAATGTCAAATCAAGAGCTCATTAGCGCCGGAAGGAAACAAATGGACCAAA
EST: gi|211004055|gb|FL319206.1|FL319206
EST:     TACTGGTACCGACCAAGTGGCCGACAAATCTCCAGTTCAAATGGCATCAG                         AAATGTCAAATCAAGAGCTCATTAGCGCCGGAAGGAAACAAATGGACCAAA
genomic: TACTGGTACCGACCAAGTGGCCGACAAATCTCCAGTTCAAATGGCATCAGgtggtcatca ... gattttacagAAATGTCAAATCAAGAGCTCATTAGCGCCGGAAGGAAACAAATGGACCAAA