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ATTGCAGCACTGATGAAAATCCCATTTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAGgtaatggacattgtgatttgtgaccatgtacctttacccccaaaccctgtacctttttttaagttactcacacaatcacacttacctttcatgttatgaa...
species | Zea mays |
transcript | GRMZM2G101250_T02 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAG ATGGGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATAATAAAEST: gi|211065127|gb|FL021094.1|FL021094
genomic: TTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAGgtaatggaca ... acctcttcagATGGGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATAATAAA
EST: TTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAG ATGGGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATAATAAAEST: gi|211065122|gb|FL021089.1|FL021089
genomic: TTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAGgtaatggaca ... acctcttcagATGGGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATAATAAA
EST: TTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAG ATGGGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATAATAAAEST: gi|211067851|gb|FL021097.1|FL021097
genomic: TTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAGgtaatggaca ... acctcttcagATGGGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATAATAAA
EST: TTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAG ATGGGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATAATAAAEST: gi|211065128|gb|FL021095.1|FL021095
genomic: TTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAGgtaatggaca ... acctcttcagATGGGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATAATAAA
EST: TTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAG ATGGGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATNATAAAEST: gi|211065119|gb|FL021086.1|FL021086
genomic: TTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAGgtaatggaca ... acctcttcagATGGGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATAATAAA
EST: TTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAG ATGGGACGTGTTGATGGCTTCTCTTCGCAGCANAACAGAGACGATAATAAAEST: gi|91056341|gb|EB166759.1|EB166759
genomic: TTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAGgtaatggaca ... acctcttcagATGGGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATAATAAA
EST: TTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAG ATGGGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATAATAAAEST: gi|211065125|gb|FL021092.1|FL021092
genomic: TTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAGgtaatggaca ... acctcttcagATGGGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATAATAAA
EST: TTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAG ATGGGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATAATAAAEST: gi|148934269|gb|EC878292.2|EC878292
genomic: TTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAGgtaatggaca ... acctcttcagATGGGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATAATAAA
EST: TTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAG ATGGGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATAATAAA
genomic: TTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAGgtaatggaca ... acctcttcagATGGGACGTGTTGATGGCTTCTCTTCGCAGCAAAACAGAGACGATAATAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTGCAGCACTGATGAAAATCCCATTTTTGGACGATGAAGAAATGCCTTCACCGAACCAACCCCTTCCTCCAAAGgtaatggacattgtgatttgtgaccatgtacctttacccccaaaccctgtacctttttttaagttactcacacaatcacacttacctttcatgttatgaa
- - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - AAGAAA