1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CCAGATTTTCACGTGGCTATGTCACCTGCAAAAGCGAAACCATTCTATGCTTCTCTAGTTGAGAAATTTCAAAGGTCATACTCGGCTGATTCAGTGAAAGgtaacaaatatgtattttataattaattcgttgcgctttacacagtttgccaacctgaattcttgaataccaaatcaatgttctctttccttttgttaac...
species | Zea mays |
transcript | GRMZM2G100260_T03 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TTCTCTAGTTGAGAAATTTCAAAGGTCATACTCGG-TGATTCAGTGAAAG ATGGTGTTTTTGGAGCGATGATGAAGEST: gi|211144461|gb|FL048072.1|FL048072
genomic: TTCTCTAGTTGAGAAATTTCAAAGGTCATACTCGGCTGATTCAGTGAAAGgtaacaaata ... tgactggcagATGGTGTTTTTGGAGCGATGATGAAG
EST: TTCTCTAGTTGAGAAATTTCAAAGGTCATACTCGGCTGATTCAGTGAAAG ATGGTGTTTTTGGAGCGATGATGAAGEST: gi|89248178|gb|DY619964.1|DY619964
genomic: TTCTCTAGTTGAGAAATTTCAAAGGTCATACTCGGCTGATTCAGTGAAAGgtaacaaata ... tgactggcagATGGTGTTTTTGGAGCGATGATGAAG
EST: TTCTCTAGTTGAGAAATTTCAAAGGTCATACTCGGCTGATTCAGTGAAAG ATGGTGTTTTTGGAGCGATGATGAAG
genomic: TTCTCTAGTTGAGAAATTTCAAAGGTCATACTCGGCTGATTCAGTGAAAGgtaacaaata ... tgactggcagATGGTGTTTTTGGAGCGATGATGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCAGATTTTCACGTGGCTATGTCACCTGCAAAAGCGAAACCATTCTATGCTTCTCTAGTTGAGAAATTTCAAAGGTCATACTCGGCTGATTCAGTGAAAGgtaacaaatatgtattttataattaattcgttgcgctttacacagtttgccaacctgaattcttgaataccaaatcaatgttctctttccttttgttaac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT