1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TGCAAAGCCACCAAAGGTTCAGCTGCACAATTCAGTTCCACAGAAGCAAGAGTTGCCAGATAGATGTATGATTCCTGCTAAACTCCCTCATGCTTCTCAGgtaagcaaatttataagttattactgtctggcctttcttttgtcaagttacagtgtatttgtgattaattcttatctataaaaggaatcattaactttcc...
species | Zea mays |
transcript | GRMZM2G098174_T01 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AGTTGCCAGATAGATGTATGATGCCTGCTAAACTCCCTCATGCTTCTCAG GTATCAGCACATTTGTCTGGAAACAATTGTCTTGGATGTGCTGCTGGGTCTEST: gi|71419126|gb|DR804656.1|DR804656
genomic: AGTTGCCAGATAGATGTATGATTCCTGCTAAACTCCCTCATGCTTCTCAGgtaagcaaat ... tttatgacagGTATCAGCACATTTGTCTGGAAACAATTGTCTTGGATGTGCTGCTGGGTCT
EST: AGTTGCCAGATAGATGTATGAATCCTGCTAAACTCCCTCATGCTTCTCAT GTATCAGCACATTTGTCTGGAAACAATTEST: gi|211180428|gb|FL072954.1|FL072954
genomic: AGTTGCCAGATAGATGTATGATTCCTGCTAAACTCCCTCATGCTTCTCAGgtaagcaaat ... tttatgacagGTATCAGCACATTTGTCTGGAAACAATT
EST: AGTTGCCAGATAGATGTATGATTCCTGCTAAACTCCCTCATGCTTCTCAG GTATCAGCACATTTGTCTGGAAACAATTGTCTTGGATGTGCTGCTGGGTCTEST: gi|211274947|gb|FL031475.1|FL031475
genomic: AGTTGCCAGATAGATGTATGATTCCTGCTAAACTCCCTCATGCTTCTCAGgtaagcaaat ... tttatgacagGTATCAGCACATTTGTCTGGAAACAATTGTCTTGGATGTGCTGCTGGGTCT
EST: AGTTGCCAGATAGATGTATGATTCCTGCTAAACTCCCTCATGCTTCTCAN GTATCAGCACATTTGTCTGGAAACAATTGTCTTGGATGTGCTGCTGGGTCTEST: gi|211180430|gb|FL072956.1|FL072956
genomic: AGTTGCCAGATAGATGTATGATTCCTGCTAAACTCCCTCATGCTTCTCAGgtaagcaaat ... tttatgacagGTATCAGCACATTTGTCTGGAAACAATTGTCTTGGATGTGCTGCTGGGTCT
EST: AGTTGCCAGATAGATGTATGATTCCTGCTAAACTCCCTCATGCTTCTCAG GTATCAGCACATTTGTCTGGAAACAATTGTCTTGGATGTGCTGCTGGGTCTEST: gi|31355908|gb|CD440265.1|CD440265
genomic: AGTTGCCAGATAGATGTATGATTCCTGCTAAACTCCCTCATGCTTCTCAGgtaagcaaat ... tttatgacagGTATCAGCACATTTGTCTGGAAACAATTGTCTTGGATGTGCTGCTGGGTCT
EST: AGTTGCCAGATAGATGTATGATGCCTGCTAAACTCCCTCATGCTTCTCAG GTATCAGCACATTTGTCTGGAAACAATTGTCTTGGATGTGCTGCTGGGTCT
genomic: AGTTGCCAGATAGATGTATGATTCCTGCTAAACTCCCTCATGCTTCTCAGgtaagcaaat ... tttatgacagGTATCAGCACATTTGTCTGGAAACAATTGTCTTGGATGTGCTGCTGGGTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCAAAGCCACCAAAGGTTCAGCTGCACAATTCAGTTCCACAGAAGCAAGAGTTGCCAGATAGATGTATGATTCCTGCTAAACTCCCTCATGCTTCTCAGgtaagcaaatttataagttattactgtctggcctttcttttgtcaagttacagtgtatttgtgattaattcttatctataaaaggaatcattaactttcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaaggaa