1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GGTTGGCAAAAAGGATGATTTGATGGTGAAAGACAAAACTGGCTTAACTCCAGCACAGCTTGCTGCCGATAAGAATCATCGGCAAGTTGCATTTTTCCTCgtgagtaaaattagccatgacatttatattttgtaatatactcgaagtcctgtttttgcagcatcataagagtcaagaatcccaatgtcctagcattacc...
species | Zea mays |
transcript | GRMZM2G087806_T01 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CAGCACAGCTTGCTGCCGATAAGAATCATCGGCAAGTTGCATTTTTCCTC GACAATGCTAGAAEST: gi|21390157|gb|BQ528206.1|BQ528206
genomic: CAGCACAGCTTGCTGCCGATAAGAATCATCGGCAAGTTGCATTTTTCCTCgtgagtaaaa ... atactttcagGACAATGCTAGAA
EST: CAGCACAGCTTGCTGCCGATAAGAATCATCGGCAAGTTGCATTTTTCCTC GACAATGCTAGAAGGGTACACGGCAGAGGATGTGGTGCGAACACCAGATTTEST: gi|50330928|gb|CO526054.1|CO526054
genomic: CAGCACAGCTTGCTGCCGATAAGAATCATCGGCAAGTTGCATTTTTCCTCgtgagtaaaa ... atactttcagGACAATGCTAGAAGGGTACACGGCAAAGGATGTGGTGCGAACACCAGATTT
EST: CAGCACAGCTTGCTGCCGATAAGAATCATCGGCAAGTTGCATTTTTCCTC GACAATGCTAGAAGGGTACACGGCAAAGGATGTGGTGCGAACACCAGATTTEST: gi|149080130|gb|EE169151.2|EE169151
genomic: CAGCACAGCTTGCTGCCGATAAGAATCATCGGCAAGTTGCATTTTTCCTCgtgagtaaaa ... atactttcagGACAATGCTAGAAGGGTACACGGCAAAGGATGTGGTGCGAACACCAGATTT
EST: CAGCACAGCTTGCTGCCGATAAGAATCATCGGCAAGTTGCATTTTTCCTC GACAATGCTAGAAGCGTACACGGCACAGGATGTGGTGCGAACA
genomic: CAGCACAGCTTGCTGCCGATAAGAATCATCGGCAAGTTGCATTTTTCCTCgtgagtaaaa ... atactttcagGACAATGCTAGAAGGGTACACGGCAAAGGATGTGGTGCGAACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTTGGCAAAAAGGATGATTTGATGGTGAAAGACAAAACTGGCTTAACTCCAGCACAGCTTGCTGCCGATAAGAATCATCGGCAAGTTGCATTTTTCCTCgtgagtaaaattagccatgacatttatattttgtaatatactcgaagtcctgtttttgcagcatcataagagtcaagaatcccaatgtcctagcattacc
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