1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GTGAAAGGGAGAAGGTTCTGAATCAGTTTCGATCTGGGCGGTCTCCCATTTTAGTGGCAACTGATGTTGCTGCGCGAGGTTTGGACATCAAAGATATCAGgttagactaacttcctttctctgttatgcatatgcatgtgtgtatgccttttgatttcttggtatgatggaataatcaggggtggatctgcaccctgaac...
species | Zea mays |
transcript | GRMZM2G078826_T01 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TTAGTGGCAACTGATGTTGCTGCGCGAGGTTTGGACATCAAAGATATCAG GGTAGTGATCAACTATGACTTCCCCACTGGTGTTGAAGACTACGTTCACAGEST: gi|87156102|gb|DY400891.1|DY400891
genomic: TTAGTGGCAACTGATGTTGCTGCGCGAGGTTTGGACATCAAAGATATCAGgttagactaa ... ctttacacagGGTAGTGATCAACTATGACTTCCCCACTGGTGTTGAAGACTACGTTCACAG
EST: TTAGTGGCAACTGATGTTGCTGCGCGAGGTTTGGACATCAAAGATATCAG GGTAGTGATCAACTATGACTTCCCCACTGGTGTTGAAGACTACGTTCACAGEST: gi|32844392|gb|CD984073.1|CD984073
genomic: TTAGTGGCAACTGATGTTGCTGCGCGAGGTTTGGACATCAAAGATATCAGgttagactaa ... ctttacacagGGTAGTGATCAACTATGACTTCCCCACTGGTGTTGAAGACTACGTTCACAG
EST: TTAGTGGCAACTGATGTTGCTGCGCGAGGTTTGGACATCAAAGATATCAG GGTAGTGATCAACTATGACTTCCCCACTGGTGTTGAAGACTACGTTCACAGEST: gi|26558556|gb|CA830791.1|CA830791
genomic: TTAGTGGCAACTGATGTTGCTGCGCGAGGTTTGGACATCAAAGATATCAGgttagactaa ... ctttacacagGGTAGTGATCAACTATGACTTCCCCACTGGTGTTGAAGACTACGTTCACAG
EST: TTAGTGGCAACTGATGTTGCTGCGCGAGGTTTGGACATCAAAGATATCAG GGTAGTGATCAACTATGACTTCCCCACTGGTGTTGAAGACTACGTTCACAGEST: gi|22472442|gb|BU036922.1|BU036922
genomic: TTAGTGGCAACTGATGTTGCTGCGCGAGGTTTGGACATCAAAGATATCAGgttagactaa ... ctttacacagGGTAGTGATCAACTATGACTTCCCCACTGGTGTTGAAGACTACGTTCACAG
EST: TTAGTGGCAACTGATGTTGCTGCGCGAGGTTTGGACATCAAAGATATCAG GGTAGTGATCAACTATGACTTCCCCACTGGTGTTGAAGACTACGTTCACAG
genomic: TTAGTGGCAACTGATGTTGCTGCGCGAGGTTTGGACATCAAAGATATCAGgttagactaa ... ctttacacagGGTAGTGATCAACTATGACTTCCCCACTGGTGTTGAAGACTACGTTCACAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGAAAGGGAGAAGGTTCTGAATCAGTTTCGATCTGGGCGGTCTCCCATTTTAGTGGCAACTGATGTTGCTGCGCGAGGTTTGGACATCAAAGATATCAGgttagactaacttcctttctctgttatgcatatgcatgtgtgtatgccttttgatttcttggtatgatggaataatcaggggtggatctgcaccctgaac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC