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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCATCAGGAAATATACTAAACAGCTTTTACATGGACTGGAATATTTGCATCGCAATGGAATCATACACAGGGATATAAAGgcacaaaaatttctcatgttatacaaattgtgtacgcaaaatggttgtgatgatgtggataattattattttgtcatattccag

Basic information

species Zea mays
transcript GRMZM2G064613_T03
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G064613_T03 (Zea mays), 5'ss of exon 5
lower sequence: LOC_Os08g32600.1 (Oryza sativa), 5'ss of exon 5
GTCATCAGGAAATATACTAAACAGCTTTTACATGGACTGGAATATTTGCATCGCAATGGAATCATACACAGGGATATAAAGgcacaaaaatttctcatgttatacaaattgtgtacgcaaaatggttgtgatgatgtggataatta--ttattttgtcatattccag-----------------
|||||||||||||| || |||||| |||| ||||| ||||| ||||| |||||||||||||||||||||||||| |||||||||  || | |  ||   ||    |  |||| | |    |||| || || ||  |||| |  | |  || |  |||   ||| | |                 
GTCATCAGGAAATACACGAAACAGATTTTGCATGGCCTGGAGTATTTACATCGCAATGGAATCATACACAGGGACATAAAGgcatgaagagtattcgaattccgaattttgt-tgccttgaatgcttttgttg-cgtgggttctaaatttgtaatgtgggattactgttttttcctatattcag