1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GTTCTGAATAAGCCTTACATGATGAAAGTACGTGTTGTACGCACAGAAACTGCCATGACAGATGTTCTTCGGGAGgtgatgattgtgtcagcttatctgtccatgcaatgctcgtattttctttttgtcatgcatatgtgacttagttctcttttaaagtttttgcccatgcttt...
species | Zea mays |
transcript | GRMZM2G057084_T01 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ACGCACAGAAACTGCCATGACAGATGTTCTTCGGGAG GTGTCCATAATGAAAATGCTGAATCACCCTAACATTGTCAATCTTGTTGAAEST: gi|60349018|gb|DN215991.1|DN215991
genomic: ACGCACAGAAACTGCCATGACAGATGTTCTTCGGGAGgtgatgattg ... tttgagacagGTGTCCATAATGAAAATGCTGAATCACCCTAACATTGTCAATCTTGTTGAA
EST: AAGTACGTGTTGTACGCACAGAAACTGCCATGACAGATGTTCTTCGGGAG GTGTCCATAATGAAAATGCTGAATCACCCTAACATTGTCAATCTTGTTGAAEST: gi|76015161|gb|DT942331.1|DT942331
genomic: AAGTACGTGTTGTACGCACAGAAACTGCCATGACAGATGTTCTTCGGGAGgtgatgattg ... tttgagacagGTGTCCATAATGAAAATGCTGAATCACCCTAACATTGTCAATCTTGTTGAA
EST: AAGTACGTGTTGTACGCACAGAAACTGCCATGACAGATGTTCTTCGGGAG GTGTCCATAATGAAAATGCTGAATCACCCTAACATTGTCAATCTTGTTGAA
genomic: AAGTACGTGTTGTACGCACAGAAACTGCCATGACAGATGTTCTTCGGGAGgtgatgattg ... tttgagacagGTGTCCATAATGAAAATGCTGAATCACCCTAACATTGTCAATCTTGTTGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTCTGAATAAGCCTTACATGATGAAAGTACGTGTTGTACGCACAGAAACTGCCATGACAGATGTTCTTCGGGAGgtgatgattgtgtcagcttatctgtccatgcaatgctcgtattttctttttgtcatgcatatgtgacttagttctcttttaaagtttttgcccatgcttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG