Skip to another splice site:
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAAGGACGAAGCCGCCGGCGAGGTCCCCGTCGCCTTCGTGGTCCGCGCCGCCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcaccagtcacgcaggctggatcacgccgcgcgccttgcttatgccatgaagaagtttgttctgacataacagtgtacgtgtgcgcgcgtgcgccgattttcag

Basic information

species Zea mays
transcript GRMZM2G054013_T02
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G054013_T02 (Zea mays), 5'ss of exon 5
lower sequence: LOC_Os02g46970.1 (Oryza sativa), 5'ss of exon 5
AAAGGACGAAGCCGCCGGCGAGGTCCCCGTCGCCTTCGTGGTCCGCGCCGCCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcaccagtcacgcaggctggatcacgccgcgcgccttgcttatgccatgaagaagtttgttctgacataacagtgtacgtgtgcgcgcgtgcgccgattttcag
|||||| || | ||||||||||||||| ||||| ||||||||||||||||||||| |||||||| |||||||  |||||||||| ||||| |||||||||||| | |   |        | | ||  ||||  |  ||        |||  || |||        || || ||  || |   ||     |||||    |    | |||
AAAGGATGACGTCGCCGGCGAGGTCCCGGTCGCGTTCGTGGTCCGCGCCGCCGACTCCGACATCACGGAGGAGTCCATCAAGGAATTCATATCCAAGCAGgtattgattggg---atgagattgacgacgcaaca-gcagcaaaattgc--tggaga-------cctcacgtacgagagcttgtcgtttcgcgtttctc----tgcag
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|148953298|gb|EE152785.2|EE152785
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|78116672|gb|DV535059.1|DV535059
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|50334551|gb|CO529677.1|CO529677
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATTTCCAAGCAG                         GTGGTATTTTACAAGAGGCTACCCAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|149029572|gb|EE154742.2|EE154742
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|149015120|gb|EE044882.2|EE044882
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|71444694|gb|DR825744.1|DR825744
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|76908948|gb|DV163148.1|DV163148
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|78105518|gb|DV523936.1|DV523936
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTTTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|84970122|gb|DW468472.1|DW468472
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTTTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|71436394|gb|DR817444.1|DR817444
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTTTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|110525250|gb|EE029434.1|EE029434
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATTTCCAAGCAG                         GTGGTATTTTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|110218616|gb|EC900514.1|EC900514
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATTTCCAAGCAG                         GTGGTATTTTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|71301601|gb|DR786864.1|DR786864
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|110940598|gb|EE160755.1|EE160755
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|74233818|gb|DT641732.1|DT641732
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|148929509|gb|EC875694.2|EC875694
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATTTCCAAGCAG                         GTGGTATTTTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|91868830|gb|EB400173.1|EB400173
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTTTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|50337464|gb|CO532590.1|CO532590
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTTTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|71758161|gb|DR956098.1|DR956098
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTTTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|91048670|gb|EB159088.1|EB159088
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|110195955|gb|EC877852.1|EC877852
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTTTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|18179985|gb|BM381195.1|BM381195
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|71419901|gb|DR804933.1|DR804933
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|78113146|gb|DV531540.1|DV531540
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|71428868|gb|DR809918.1|DR809918
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|78125600|gb|DV543984.1|DV543984
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|76019685|gb|DT946855.1|DT946855
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|78074957|gb|DV503391.1|DV503391
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|86467988|gb|DY234358.1|DY234358
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTTTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|37421492|gb|CF648446.1|CF648446
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|149108495|gb|EE189681.2|EE189681
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|76019686|gb|DT946856.1|DT946856
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|94474516|gb|EB703474.1|EB703474
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GGGGTATTTTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|78119428|gb|DV537812.1|DV537812
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|149105640|gb|EE291190.2|EE291190
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTAC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTAC
EST: gi|71322982|gb|DR798164.1|DR798164
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC
EST: gi|78082796|gb|DV511189.1|DV511189
EST:     CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAG                         GTGGTATTTTACAAGAGGCTACACAAGGTGTATTTCACCCCCTCCATCCCC
genomic: CCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 3 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 14

AAAGGACGAAGCCGCCGGCGAGGTCCCCGTCGCCTTCGTGGTCCGCGCCGCCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCCAAGTCGGCGTCCGGGAAGATCCTGAGGAGGGAGCTGCGCGCCAAGCTCG


Block sizes: 47 (upstream exon), 45 (downstream exon)
Score: 11

AAAGGACGAAGCCGCCGGCGAGGTCCCCGTCGCCTTCGTGGTCCGCGCCGCCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCCAAGTCGGCGTCCGGGAAGATCCTGAGGAGGGAGCTGCGCGCCAAGCTCG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 17

AAAGGACGAAGCCGCCGGCGAGGTCCCCGTCGCCTTCGTGGTCCGCGCCGCCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcacca ... cgattttcagGTGGTATTCTACAAGAGGCTACACAAGGTGTACTTCACCCCCTCCATCCCCAAGTCGGCGTCCGGGAAGATCCTGAGGAGGGAGCTGCGCGCCAAGCTCG


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
AAAGGACGAAGCCGCCGGCGAGGTCCCCGTCGCCTTCGTGGTCCGCGCCGCCGACGCCGACATCGCGGAGGACGCCATCAAGGAGTTCATCTCCAAGCAGgtactcaccagtcacgcaggctggatcacgccgcgcgccttgcttatgccatgaagaagtttgttctgacataacagtgtacgtgtgcgcgcgtgcgccgattttcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - -CGACGCCG