1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TACAATGGATCTGGTTTGCACAACCATCACAACTTTAGGGGCCGTGGAAGGGGTAGAGGGAGTGCGgtatgctgatacaatccattttttatttgttttgatcatatttaatgacaagggatgctaatttaaccctcgtctcatggttcatgtccttacattttgc...
species | Zea mays |
transcript | GRMZM2G051622_T02 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TGCACAACCATCACAATTTTAGGGGCCGTGGAAGGGGTAGAGGGAGTGCG TTTTCACAGTCAGTAACAACATTCACTGAEST: gi|32850090|gb|CD989771.1|CD989771
genomic: TGCACAACCATCACAACTTTAGGGGCCGTGGAAGGGGTAGAGGGAGTGCGgtatgctgat ... tcctttgcagTTTTCACAGTCAGTAACAACATTCACTGA
EST: TGCACAACCATCACAACTTTAGGGGCCGTGGAAGGGGTAGAGGGAGTGCG TTTTCACAGTCAGTAACAACATTCACTGAAGAATTTGATTTCACGGCCATGEST: gi|32807432|gb|CD959666.1|CD959666
genomic: TGCACAACCATCACAACTTTAGGGGCCGTGGAAGGGGTAGAGGGAGTGCGgtatgctgat ... tcctttgcagTTTTCACAGTCAGTAACAACATTCACTGAAGAATTTGATTTCACGGCCATG
EST: TGCACAACCATCACAACTTTAGGGGCCGTGGAAGGGGTAGAGGGAGTGCG TTTTCACAGTCAGTAACAACATTCACTGAAGAATTTGATTTCACGGCCATGEST: gi|29946634|gb|CB816248.1|CB816248
genomic: TGCACAACCATCACAACTTTAGGGGCCGTGGAAGGGGTAGAGGGAGTGCGgtatgctgat ... tcctttgcagTTTTCACAGTCAGTAACAACATTCACTGAAGAATTTGATTTCACGGCCATG
EST: TGCACAACCATCACAACTTTAGGGGCCGTGGAAGGGGTAGAGGGAGTGCG TTTTCACAGTCAGTAACAACATTCACTGAAGAATTTGATTTCACGGCCATG
genomic: TGCACAACCATCACAACTTTAGGGGCCGTGGAAGGGGTAGAGGGAGTGCGgtatgctgat ... tcctttgcagTTTTCACAGTCAGTAACAACATTCACTGAAGAATTTGATTTCACGGCCATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TACAATGGATCTGGTTTGCACAACCATCACAACTTTAGGGGCCGTGGAAGGGGTAGAGGGAGTGCGgtatgctgatacaatccattttttatttgttttgatcatatttaatgacaagggatgctaatttaaccctcgtctcatggttcatgtccttacattttgc
- - - - - - - - - - - - - - - - - - - - - - TGGAAG