1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GCAACGGTTGGAGGATGGACCCTTGTCCTAACTGGGCAAACTGGTGTTGGAAAATCAgtatgttcatccctcgcacttcgaacatgttgtacccaaatgatgaaagcgagtttgggctcaatttgattaaggacagctgttagtttgttcagtagac...
species | Zea mays |
transcript | GRMZM2G051138_T02 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TTGGAGGATGGACCCTTGTCCTAACTGGGCAAACTGGTGTTGGAAAATCA GCAACTGTGAGAGCAATTGCTGATGACCTTGGAGCAGACTTATGTGAGTGGEST: gi|78079477|gb|DV507889.1|DV507889
genomic: TTGGAGGATGGACCCTTGTCCTAACTGGGCAAACTGGTGTTGGAAAATCAgtatgttcat ... ttcatcccagGCAACTGTGAGAGCAATTGCTGATGACCTTGGAGCAGACTTATGTGAGTGG
EST: TTGGAGGATGGACCCTTGTCCTAACTGGGCAAACTGGTGTTGGAAAATCA GCAACTGTGAGAGCAATTGCTGATGACCTTGGAGCAGACTTATGTGAGTGG
genomic: TTGGAGGATGGACCCTTGTCCTAACTGGGCAAACTGGTGTTGGAAAATCAgtatgttcat ... ttcatcccagGCAACTGTGAGAGCAATTGCTGATGACCTTGGAGCAGACTTATGTGAGTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCAACGGTTGGAGGATGGACCCTTGTCCTAACTGGGCAAACTGGTGTTGGAAAATCAgtatgttcatccctcgcacttcgaacatgttgtacccaaatgatgaaagcgagtttgggctcaatttgattaaggacagctgttagtttgttcagtagac
- - - TTGGAG
- - - - TGGAGG
- - - - GGAGGA
- - - - - GAGGAT
- - - - - AGGATG
- - - - - - GATGGA