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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGTCCTTTATCCACAATCACTTGGCATTTTTAGTAAAATACCACAAGGATGAAACTACAGATCTCTCTAGAATTGTTGGATTTGAGGTCAAACCATTCAGgttagttttagttatgcttgccctattttgttagtatgatgcctttcacgctgacactatcttgtttactaacttatactttttttgttaaatttctcatgccag

Basic information

species Zea mays
transcript GRMZM2G046005_T01
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G046005_T01 (Zea mays), 5'ss of exon 5
lower sequence: Vv04s0008g06640.t01 (Vitis vinifera), 5'ss of exon 5
AGTCCTTTATCCACAATCACTTGGCATTTTTAGTAAAATACCACAAGGATGAAACTACAGATCTCTCTAGAATTGTTGGATTTGAGGTCAAACCATTCAGgttagttttagttatgcttgccctattttgttagtatgatgcctttcacgctgacactatcttgtttactaac-ttatacttttt-ttgttaaatttctcatgccag
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AGTATTTTATCCACAATCATTTGATATTTACCGTCAAGTTTCATAAAGATTTGCAAACTGACTCAGCAAGGATTGTGGGATTTGAGGTCAAACCATTCAGgtgagttcttgctggtcgttgactattg----aagttgat--ctttccccccagtagtatatatactgatgacattataatatttgctattggatgcatccag----