1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GGCTTTTGAAATTGTTAGTGGGAAGAGTGAAACCAAGGCACCAGCACCACCAAGCAGTAGTAACCACAGCAATATCAAACCGAAGTCTAACAACAAAAAGgtgacatctgttttgaaatatgcctatacggctataccatgagtttgactaatcttgaaatccttcatttaaaaaatatctctttgctatagttagttat...
species | Zea mays |
transcript | GRMZM2G038066_T02 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CAAGCAGTAGTAACCACAGCAATATCAAACCGAAGTCTAACAACAAAAAG AAACCACCGGAGCCTAAGGTGAAGCAGCCAAAGCCGCGTGCCCCTGCAGAGEST: gi|60351395|gb|DN218368.1|DN218368
genomic: CAAGCAGTAGTAACCACAGCAATATCAAACCGAAGTCTAACAACAAAAAGgtgacatctg ... aaacgtgcagAAACCACCGGAGCCTAAGGTGAAGCAGCCAAAGCCGCGTGCCCCTGCAGAG
EST: CAAGCAGTAGTAACCACAGCAATATCAAACCGAAGTCTAACAACAAAAAG AAACCACCGGAGCCTAAGGTGAAGCAGCCAAAGCCGCGTGCCCCTGCAGAGEST: gi|78104974|gb|DV523392.1|DV523392
genomic: CAAGCAGTAGTAACCACAGCAATATCAAACCGAAGTCTAACAACAAAAAGgtgacatctg ... aaacgtgcagAAACCACCGGAGCCTAAGGTGAAGCAGCCAAAGCCGCGTGCCCCTGCAGAG
EST: CAAGCAGTAGTAACCACAGCAATATCAAACCGAAGTCTAACAACAAAAAG AAACCACCGGAGCCTAAGGTGAAGCAGCCAAAGCCGCGTGCCCCTGCAGAGEST: gi|78023453|gb|DV491840.1|DV491840
genomic: CAAGCAGTAGTAACCACAGCAATATCAAACCGAAGTCTAACAACAAAAAGgtgacatctg ... aaacgtgcagAAACCACCGGAGCCTAAGGTGAAGCAGCCAAAGCCGCGTGCCCCTGCAGAG
EST: CAAGCAGTAGTAACCACAGCAATATCAAACCGAAGTCCAACAACAAAAAG AAACCACCGGAGCCTAAGGTGAAGCAGCCAAAGCCGCGTGCCCCTGCAGAGEST: gi|211270508|gb|FL357031.1|FL357031
genomic: CAAGCAGTAGTAACCACAGCAATATCAAACCGAAGTCTAACAACAAAAAGgtgacatctg ... aaacgtgcagAAACCACCGGAGCCTAAGGTGAAGCAGCCAAAGCCGCGTGCCCCTGCAGAG
EST: CAAGCAGTAGTAACCACAGCAATATCAAACCGAAGTCCAACAACAAAAAG AAACCACCGGAGCCTAAGGTGAAGCAGCCAAAGCCGCGTGCCCCTGCAGAGEST: gi|71303863|gb|DR788046.1|DR788046
genomic: CAAGCAGTAGTAACCACAGCAATATCAAACCGAAGTCTAACAACAAAAAGgtgacatctg ... aaacgtgcagAAACCACCGGAGCCTAAGGTGAAGCAGCCAAAGCCGCGTGCCCCTGCAGAG
EST: CAATATCAAACCGAAGTCTAACAACAAAAAG AAACCACCGGAGCCTAAGGTGAAGCAGCCAAAGCCGCGTGCCCCTGCAGAGEST: gi|211465755|gb|FL467271.1|FL467271
genomic: CAATATCAAACCGAAGTCTAACAACAAAAAGgtgacatctg ... aaacgtgcagAAACCACCGGAGCCTAAGGTGAAGCAGCCAAAGCCGCGTGCCCCTGCAGAG
EST: CAAGCAGTAGTAACCACAGCAATATCAAACCGAAGTCCAACAACAAAAAG AAACCACCGGAGCCTAAGGTGAAGCAGCCAAAGCCGCGTGCCCCTGCAGAGEST: gi|60348743|gb|DN215716.1|DN215716
genomic: CAAGCAGTAGTAACCACAGCAATATCAAACCGAAGTCTAACAACAAAAAGgtgacatctg ... aaacgtgcagAAACCACCGGAGCCTAAGGTGAAGCAGCCAAAGCCGCGTGCCCCTGCAGAG
EST: CAAGCAGTAGTAACCACAGCAATATCAAACCGAAGTCTAACAACAAAAAG AAACCACCGGAGCCTAAGGTGAAGCAGCCAAAGCCGCGTGCCCCTGCAGAG
genomic: CAAGCAGTAGTAACCACAGCAATATCAAACCGAAGTCTAACAACAAAAAGgtgacatctg ... aaacgtgcagAAACCACCGGAGCCTAAGGTGAAGCAGCCAAAGCCGCGTGCCCCTGCAGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCTTTTGAAATTGTTAGTGGGAAGAGTGAAACCAAGGCACCAGCACCACCAAGCAGTAGTAACCACAGCAATATCAAACCGAAGTCTAACAACAAAAAGgtgacatctgttttgaaatatgcctatacggctataccatgagtttgactaatcttgaaatccttcatttaaaaaatatctctttgctatagttagttat
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