1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
GTTGCCTCCTGGCACACAGTTTGATTTATTTAGAGGAACTGCTGCAATGAAGCAGGATGAAGAAGAAACATACCCTACTTCCTTATCTCATCAAATAAAGgtgatttagcttctgatagtatttacttttcctcttatatttcctcttttttacttgatagcaagaagtaattaatatgaactttagaaaaatgaaaagc...
species | Zea mays |
transcript | GRMZM2G037683_T01 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AGCAGGATGAAGAAGAAACATACCCTACTTCCTTATCTCATCAAATAAAG TTTGGGAAGAAAACTCATCCTGAATGTGCTCGATTTTCACCTGATGGTCAGEST: gi|67019283|gb|CO448032.1|CO448032
genomic: AGCAGGATGAAGAAGAAACATACCCTACTTCCTTATCTCATCAAATAAAGgtgatttagc ... attcttgcagTTTGGGAAGAAAACTCATCCTGAATGTGCTCGATTTTCACCTGATGGTCAG
EST: AGCAGGATGAAGAAGAAACATACCCTACTTCCTTATCTCATCAAATAAAG TTTGGGAAGAAAACTCATCCTGAATGTGCTCGATTTTCACCTGATGGTCAGEST: gi|23357683|gb|BU645332.1|BU645332
genomic: AGCAGGATGAAGAAGAAACATACCCTACTTCCTTATCTCATCAAATAAAGgtgatttagc ... attcttgcagTTTGGGAAGAAAACTCATCCTGAATGTGCTCGATTTTCACCTGATGGTCAG
EST: AGCAGGATGAAGAAGAAACATACCCTACTTCCTTATCTCATCAAATAAAG TTTGGGAAGAAAACTCATCCTGAATGTGCTCGATTTTCACCTGATGGTCAGEST: gi|22521028|gb|BU079839.1|BU079839
genomic: AGCAGGATGAAGAAGAAACATACCCTACTTCCTTATCTCATCAAATAAAGgtgatttagc ... attcttgcagTTTGGGAAGAAAACTCATCCTGAATGTGCTCGATTTTCACCTGATGGTCAG
EST: AGCAGGATGAAGAAGAAACATACCCTACTTCCTTATCTCATCAAATAAAG TTTGGGAAGAAAACTCATCCTGAATGTGCTCGATTTTCACCTGATGGTCAGEST: gi|211160334|gb|FL327726.1|FL327726
genomic: AGCAGGATGAAGAAGAAACATACCCTACTTCCTTATCTCATCAAATAAAGgtgatttagc ... attcttgcagTTTGGGAAGAAAACTCATCCTGAATGTGCTCGATTTTCACCTGATGGTCAG
EST: AGCAGGATGAAGAAGAAACATACCCTACTTCCTTATCTCATCAAATAAAG TTTGGGAAGAAAACTCATCCTGAATGTGCTCGATTTTCACCTGATGGTCAGEST: gi|26457208|gb|CA828791.1|CA828791
genomic: AGCAGGATGAAGAAGAAACATACCCTACTTCCTTATCTCATCAAATAAAGgtgatttagc ... attcttgcagTTTGGGAAGAAAACTCATCCTGAATGTGCTCGATTTTCACCTGATGGTCAG
EST: AGCAGGATGAAGAAGAAACATACCCTACTTCCTTATCTCATCAAATAAAG TTTGGGAAGAAAACTCATCCTGAATGTGCTCGATTTTCACCTGATGGGTCAEST: gi|91873183|gb|EB403140.1|EB403140
genomic: AGCAGGATGAAGAAGAAACATACCCTACTTCCTTATCTCATCAAATAAAGgtgatttagc ... attcttgcagTTTGGGAAGAAAACTCATCCTGAATGTGCTCGATTTTCACCTGAT-GGTCA
EST: AGCAGGATGAAGAAGAAACATACCCTACTTCCTTATCTCATCAAATAAAG TTTGGGAAGAAAACTCATCCTGAATGTGCTCGATTTTCACCTGATGGTCAG
genomic: AGCAGGATGAAGAAGAAACATACCCTACTTCCTTATCTCATCAAATAAAGgtgatttagc ... attcttgcagTTTGGGAAGAAAACTCATCCTGAATGTGCTCGATTTTCACCTGATGGTCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGCCTCCTGGCACACAGTTTGATTTATTTAGAGGAACTGCTGCAATGAAGCAGGATGAAGAAGAAACATACCCTACTTCCTTATCTCATCAAATAAAGgtgatttagcttctgatagtatttacttttcctcttatatttcctcttttttacttgatagcaagaagtaattaatatgaactttagaaaaatgaaaagc
- - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aagaagta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tagaaaaa