1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
AAGATCACCTGCAGTTCCTGGATCATATATACCAGGCTCATACACTCCAATGATGATCTCATCTGGAATGGTTCCATTGCAAGGATGGAGCCCTTATCCGgtaaataatttggacaaaatgctttattttgatagaaggaaaggttcctaccaacaagcttctaccaagatataaagcaaatgagcaagctctttcatga...
species | Zea mays |
transcript | GRMZM2G036837_T02 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AGGATGGAGCCCTTATCCG GCATCGGTAAATCCTGTGGCATCAGGTGGAGCACAACAAACTGTTCAAGCTEST: gi|26560091|gb|CA832326.1|CA832326
genomic: AGGATGGAGCCCTTATCCGgtaaataatt ... tttgatgcagGCATCGGTAAATCCTGTGGCATCAGGTGGAGCACAACAAACTGTTCAAGCT
EST: GCAAGGATGGAGCCCTTATCCG GCATC-GTAAATCCTGTGGCATCAGG-GGAGCACAACAAACTGTTCAAGCT
genomic: GCAAGGATGGAGCCCTTATCCGgtaaataatt ... tttgatgcagGCATCGGTAAATCCTGTGGCATCAGGTGGAGCACAACAAACTGTTCAAGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGATCACCTGCAGTTCCTGGATCATATATACCAGGCTCATACACTCCAATGATGATCTCATCTGGAATGGTTCCATTGCAAGGATGGAGCCCTTATCCGgtaaataatttggacaaaatgctttattttgatagaaggaaaggttcctaccaacaagcttctaccaagatataaagcaaatgagcaagctctttcatga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggacaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaggaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaagcaaa