1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CCTTCTTTGACCTTTAGGTATGCATACGCTGTTGCTAGCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAGgtgctctatttgtttgcttttttatcttggtagtattccttacttcaaataatgtgtgtttgactgacatgatggtaaaaaacaaatacag
species | Zea mays |
transcript | GRMZM2G035595_T02 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CGCATTGCATGGAGTTCATCAT-TCCCTTCGTAAAGATTTCATGATCCAG CCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTATEST: gi|211246948|gb|FL479530.1|FL479530
genomic: CGCATTGCATGGAGTTCATCATAT-CCTTCGTAAAGATTTCATGATCCAGgtgctctatt ... acaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
EST: GGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAG CCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTATEST: gi|211541587|gb|FL476015.1|FL476015
genomic: GGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAGgtgctctatt ... acaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
EST: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAG CCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTATEST: gi|211025730|gb|FL435838.1|FL435838
genomic: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAGgtgctctatt ... acaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
EST: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAG CCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
genomic: GCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAGgtgctctatt ... acaaatacagCCACCTTTTGATACAAAGCTCCAGAATACATTTATAATCCACTTCACTTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCTTCTTTGACCTTTAGGTATGCATACGCTGTTGCTAGCGCATTGCATGGAGTTCATCATATCCTTCGTAAAGATTTCATGATCCAGgtgctctatttgtttgcttttttatcttggtagtattccttacttcaaataatgtgtgtttgactgacatgatggtaaaaaacaaatacag
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