1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ACTCTTGAACGAAAAGAGTGACATTTACAGCTTTGGAGTCGTTCTCCTTGAAGCAATTACCGGAAGGGATCCTGTTGACTATGGACGCCCACCAAACGAGgtattgataaattggtcaatattctttgctttagtgctaacctacatgatagaccttgcttgtgtagttagatatgtttaggtttgaagcaataacagac...
species | Zea mays |
transcript | GRMZM2G034855_T02 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AAGCAATTACCGGAAGGGATCCTGTTGACTATGGACGCCCACCAAACGAG GTGAATCTAGTTGACTGGCTAAAAATGATGGTTGCCAGCAGGCGGTCAGAAEST: gi|5936692|gb|AW059960.1|AW059960
genomic: AAGCAATTACCGGAAGGGATCCTGTTGACTATGGACGCCCACCAAACGAGgtattgataa ... ccatttgcagGTGAATCTAGTTGACTGGCTAAAAATGATGGTTGCCAGCAGGCGGTCAGAA
EST: AAGCAATTACCGGAAGGGATCCTGTTGACTATGGACGCCCACCAAACGAG GTGAATCTAGTTGACTGGCTAAAAATGATGGTTGCCAGCAGGCGGTCAGAA
genomic: AAGCAATTACCGGAAGGGATCCTGTTGACTATGGACGCCCACCAAACGAGgtattgataa ... ccatttgcagGTGAATCTAGTTGACTGGCTAAAAATGATGGTTGCCAGCAGGCGGTCAGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTCTTGAACGAAAAGAGTGACATTTACAGCTTTGGAGTCGTTCTCCTTGAAGCAATTACCGGAAGGGATCCTGTTGACTATGGACGCCCACCAAACGAGgtattgataaattggtcaatattctttgctttagtgctaacctacatgatagaccttgcttgtgtagttagatatgtttaggtttgaagcaataacagac
- - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA