Skip to another splice site:
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcacacggcattattctctctctctctctctctctctctctcataggaaaacataattgcagaagttcttttgtgcagcttccagtgcaatgcc...

Basic information

species Zea mays
transcript GRMZM2G012052_T01
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G012052_T01 (Zea mays), 5'ss of exon 5
lower sequence: LOC_Os05g38550.2 (Oryza sativa), 5'ss of exon 5
GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcacacggcattattctctctctctctctctctctctctctcatagga--aaacataattgcagaagttcttttgtgcagcttccagtgcaatgcc
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| || |||||||||| ||   |   |||     |||||  | || |||  |     | |  ||   ||     | |||       |   |   | |  |||    ||
GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcactcgttgtctatctgcaattctcttgccctttcttacgtgctgcattaagtctagacttacaagaggaacggaaaattattc--tgctgctcc

upper sequence: GRMZM2G012052_T01 (Zea mays), 5'ss of exon 5
lower sequence: Vv08s0007g00120.t01 (Vitis vinifera), 5'ss of exon 5
GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagt-gcacacggcattattctctctctctctctctctct-------ctctctcataggaaaacataattgcagaagttcttttgtgcagcttccagtgcaatgcc
|||||||| |||||| |||| ||||| || ||||| || ||||||||||| || ||||| || ||||| |||||||| ||||||   |  | |  |  ||  |||      | |   | |       |  |          ||||| | |  |  | |  |||||  |   | |   || |     
GTTGAAAGCATAGTTTTGAGTATCATATCAATGCTTTCAAGTCCAAATGATGAATCTCCTGCAAATATTGAAGCTGCTgtaagttaaattctgactcgttacctcatctagtattagtttggggattccattcttcttattaacattaatctaacattaattttgctc---tccacatgta-----

upper sequence: GRMZM2G012052_T01 (Zea mays), 5'ss of exon 5
lower sequence: Vv06s0004g04430.t01 (Vitis vinifera), 5'ss of exon 5
GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtg-cacacggcattattctctctctctctctctctctc--tctctcataggaaaacataattgcagaagttcttttgtgcagcttccagtgcaatgcc
||||||||||||||| |||| ||||| |||||||| || || || ||||| || || || || || || |||||||| ||||||| |||   |   ||| |   | |  |    || |  |    |||| |     |   |  ||| | |  | ||||| | | | |  || |    ||  
GTTGAAAGTATAGTTTTGAGTATCATATCGATGCTTTCCAGCCCTAATGATGAATCACCTGCAAACATTGAAGCTGCAgtaagtgacacttagttgtatgccaccacaattctcctttggcaacttctctttatttatggtgtttgta-atttacttttctac-gttgacaataggctga-

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|78106424|gb|DV524842.1|DV524842
EST:     CGATGCTCTTTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|60397439|gb|DN230255.1|DN230255
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|32866577|gb|CF006259.1|CF006259
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|32866578|gb|CF006260.1|CF006260
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|211202269|gb|FL182834.1|FL182834
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGA
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGA
EST: gi|78106425|gb|DV524843.1|DV524843
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|211199710|gb|FL182823.1|FL182823
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGCCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|60349853|gb|DN216826.1|DN216826
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|15590017|gb|BI674633.1|BI674633
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|32859566|gb|CD999247.1|CD999247
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|32912414|gb|CF017226.1|CF017226
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAA
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAA
EST: gi|32936967|gb|CF041786.1|CF041786
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|32937161|gb|CF041980.1|CF041980
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGA
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGA
EST: gi|67032154|gb|CO460903.1|CO460903
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|4573358|gb|AI586917.1|AI586917
EST:     ATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: ATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|32937054|gb|CF041873.1|CF041873
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAA
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAA
EST: gi|211124251|gb|FL435188.1|FL435188
EST:     CGATGCTCTCTAGTCCAAATGACGAGTYTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|211202278|gb|FL182843.1|FL182843
EST:     CGATGCTCTCTAGTCCAAATGACGAGCCTCCAGCGAATATCGAAGCTGCC                         AAGGAATTGGAAAGAAAAAG-GGGATGAGTTCCAAGAAAAAG
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGA-TTGGAGAGAAAA-GCGGGATGAGTTC-AAGAAAAAG
EST: gi|87157616|gb|DY402405.1|DY402405
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|4646408|gb|AI491587.2|AI491587
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|40335355|gb|CK369425.1|CK369425
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|113702787|gb|EE680291.1|EE680291
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|211063555|gb|FL182811.1|FL182811
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAA
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAA
EST: gi|8665719|gb|BE186535.1|BE186535
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|67043112|gb|CO469367.1|CO469367
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|6102130|gb|AW126600.1|AW126600
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|211202267|gb|FL182832.1|FL182832
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|32865547|gb|CF005229.1|CF005229
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGC
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGC
EST: gi|15080583|gb|BI389111.1|BI389111
EST:     GTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: GTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|32865546|gb|CF005228.1|CF005228
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|32934222|gb|CF039034.1|CF039034
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAGGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|16927032|gb|BM080101.1|BM080101
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|213182646|gb|FM192378.1|FM192378
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|37397234|gb|CF635912.1|CF635912
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|21843234|gb|BQ703815.1|BQ703815
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAG
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAG
EST: gi|50323827|gb|CO518953.1|CO518953
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|32910355|gb|CF015167.1|CF015167
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAGAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|78081300|gb|DV509712.1|DV509712
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|16926454|gb|BM079522.1|BM079522
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|22818858|gb|BU498948.1|BU498948
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|78081299|gb|DV509711.1|DV509711
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|26559697|gb|CA831932.1|CA831932
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|78022177|gb|DV490564.1|DV490564
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|9732279|gb|BE511031.1|BE511031
EST:     CGATGCTCTCTAGTCCAAATGTCGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|60345359|gb|DN212332.1|DN212332
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|13126118|gb|BG316688.1|BG316688
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|28568878|gb|CB280753.1|CB280753
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|32935615|gb|CF040427.1|CF040427
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|13126542|gb|BG317112.1|BG317112
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|15082608|gb|BI389292.1|BI389292
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|211063553|gb|FL182809.1|FL182809
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         CAGGGAT-G-AGAGAAAAGCGGGATGAGTTCA-GAAAAAGGTAAG
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGG-ATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAG
EST: gi|32854784|gb|CD994465.1|CD994465
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|32855663|gb|CD995344.1|CD995344
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|60397474|gb|DN230290.1|DN230290
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|5325242|gb|AI783433.1|AI783433
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|37382707|gb|CF628315.1|CF628315
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|15057056|gb|BI361028.1|BI361028
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|26557802|gb|CA830037.1|CA830037
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|32936878|gb|CF041697.1|CF041697
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAA
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAA
EST: gi|60396215|gb|DN229084.1|DN229084
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|71764281|gb|DR962218.1|DR962218
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|60395236|gb|DN228105.1|DN228105
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|211063550|gb|FL182806.1|FL182806
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAA
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAA
EST: gi|5860471|gb|AW011693.1|AW011693
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|32936865|gb|CF041684.1|CF041684
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|211063559|gb|FL182815.1|FL182815
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCG
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCG
EST: gi|31360886|gb|CD445243.1|CD445243
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|4646409|gb|AI621736.1|AI621736
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|60340966|gb|DN207939.1|DN207939
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|76289728|gb|DV029296.1|DV029296
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|12968894|gb|BG265735.1|BG265735
EST:     AGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: AGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|32936023|gb|CF040835.1|CF040835
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|32868626|gb|CF008308.1|CF008308
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|32936126|gb|CF040938.1|CF040938
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAA
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAA
EST: gi|32936903|gb|CF041722.1|CF041722
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGA
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGA
EST: gi|211202274|gb|FL182839.1|FL182839
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|21891417|gb|BQ744630.1|BQ744630
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|60399525|gb|DN232336.1|DN232336
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|32915813|gb|CF020625.1|CF020625
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGG
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGG
EST: gi|60341208|gb|DN208181.1|DN208181
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|211199708|gb|FL182821.1|FL182821
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGGCA-TG
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGG-CAATG
EST: gi|76917380|gb|DV166802.1|DV166802
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
EST: gi|9732280|gb|BE511032.1|BE511032
EST:     CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCC                         AAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT
genomic: CGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 356

GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGTGTCCGCAAATCTCAGGAAATGCTCTGAAGGAGAAACATATGGGGAGTTG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 519

GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGTGTCCGCAAATCTCAGGAAATGCTCTGAAGGAGAAACATATGGGGAGTTG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 773

GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGTGTCCGCAAATCTCAGGAAATGCTCTGAAGGAGAAACATATGGGGAGTTG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 577

GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcac ... tgtcttgcagAAGGATTGGAGAGAAAAGCGGGATGAGTTCAAGAAAAAGGTAAGGCAATGTGTCCGCAAATCTCAGGAAATGCTCTGAAGGAGAAACATATGGGGAGTTG


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcacacggcattattctctctctctctctctctctctctctcataggaaaacataattgcagaagttcttttgtgcagcttccagtgcaatgcc

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tctctctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaacata