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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttctctttactcatgtatacctattgaattcaaaacctatattattagatatatctccttttgtgttcttgatcccatcctttttgctacacag...

Basic information

species Zea mays
transcript GRMZM2G001887_T03
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|14364863|gb|BG946674.1|BG946674
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|18385240|gb|BM418439.1|BM418439
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|18172412|gb|BM347800.1|BM347800
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCATGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|60394804|gb|DN227674.1|DN227674
EST:     AGCTGCAAGATCTGCTTCGGTCGATTATCAACCAGGTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|60339434|gb|DN206407.1|DN206407
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|22819814|gb|BU499904.1|BU499904
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|32807656|gb|CD959890.1|CD959890
EST:     GATCTACTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: GATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|78087437|gb|DV515830.1|DV515830
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|32931902|gb|CF036714.1|CF036714
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|60346649|gb|DN213622.1|DN213622
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|211138546|gb|FL389992.1|FL389992
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|60340677|gb|DN207650.1|DN207650
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|16925652|gb|BM078720.1|BM078720
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|27522108|gb|CA989214.1|CA989214
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|32806383|gb|CD958617.1|CD958617
EST:     GATCTACTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: GATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|21760021|gb|BQ635562.1|BQ635562
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|71427873|gb|DR808923.1|DR808923
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|38687563|gb|CK144594.1|CK144594
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|211207058|gb|FL397903.1|FL397903
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCA
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCA
EST: gi|60401056|gb|DN233863.1|DN233863
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|18177681|gb|BM378891.1|BM378891
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|18165115|gb|BM334954.1|BM334954
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|32823073|gb|CD962795.1|CD962795
EST:     GATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: GATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|32808895|gb|CD961129.1|CD961129
EST:     GATCTACTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: GATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|211381842|gb|FL377370.1|FL377370
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAGTCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|18649472|gb|BM498291.1|BM498291
EST:     TCAACCAGC-TG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: TCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|60342382|gb|DN209355.1|DN209355
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|18450388|gb|BM428666.1|BM428666
EST:     TGCTTCCGTCGATTATCAACCAGC-TG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: TGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|6918526|gb|AW400056.1|AW400056
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|47962818|gb|CN845527.1|CN845527
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|211296941|gb|FL404454.1|FL404454
EST:     CAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: CAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|29130307|gb|CB381011.1|CB381011
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|7031231|gb|AW461119.1|AW461119
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|45567234|gb|CK985471.1|CK985471
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|60400933|gb|DN233740.1|DN233740
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|32806756|gb|CD958990.1|CD958990
EST:     GATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: GATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|149014130|gb|EE043671.2|EE043671
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|14243944|gb|BG841641.2|BG841641
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|78119546|gb|DV537930.1|DV537930
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|211443775|gb|FL403728.1|FL403728
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|9794276|gb|BE552584.1|BE552584
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|32807332|gb|CD959566.1|CD959566
EST:     GATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: GATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|211269426|gb|FK963247.1|FK963247
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGA--AATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|9794715|gb|BE553023.1|BE553023
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|32807982|gb|CD960216.1|CD960216
EST:     GATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: GATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|78107786|gb|DV526204.1|DV526204
EST:     TGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: TGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|21843331|gb|BQ703912.1|BQ703912
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|149017495|gb|EE045693.2|EE045693
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|32809284|gb|CD961518.1|CD961518
EST:     GATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: GATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|74235700|gb|DT643614.1|DT643614
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|83278322|gb|DV942330.1|DV942330
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|32792880|gb|CD945116.1|CD945116
EST:     GATCTGCTTCCGTCGATTATCAACCAGCTTA                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: GATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|78084435|gb|DV512828.1|DV512828
EST:     AGATGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|148956153|gb|EC901928.2|EC901928
EST:     AGCTGCAAGATTTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATTTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
EST: gi|16925877|gb|BM078945.1|BM078945
EST:     AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTG                         GTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC
genomic: AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttct ... tccggttcagGTCCTGACAACCTGGACAATCTGCGGAGGCTCGCAGAGCAATTCCAGAAGC

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
AGCTGCAAGATCTGCTTCCGTCGATTATCAACCAGCTTGgtatgtttctctttactcatgtatacctattgaattcaaaacctatattattagatatatctccttttgtgttcttgatcccatcctttttgctacacag

- - GCAAGA