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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAGGGTAGGGACCTGATTGATATCGCTCAAACAGGCTCAGGGAAAACATTATCTTATCTGTTACCTAGGTTGGTTCATGTTGGTGCCCAGCCTCGGCTAGgttggtttcctataaacttgttgtgagctttctgtatgttttctgactgtgtccatttcccttttaatattatttgttattctaattcctgtagaacaag...

Basic information

species Zea mays
transcript AC217043.3_FGT002
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AC217043.3_FGT002 (Zea mays), 5'ss of exon 5
lower sequence: LOC_Os01g68320.3 (Oryza sativa), 5'ss of exon 3
AAGGGTAGGGACCTGATTGATATCGCTCAAACAGGCTCAGGGAAAACATTATCTTATCTGTTACCTAGGTTGGTTCATGTTGGTGCCCAGCCTCGGCTAGgttggtttcctataaacttgttgtgagctttctgtatgttttctgactgtgtccatttcccttttaatattatttgttattctaattcctgtagaacaag
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AAGGGCAGGGACATGATCGGTATCGCACAAACTGGCTCTGGGAAAACACTATCTTACCTTCTCCCTGGGTTGGTTCATGTTGGTGCACAGCCTCGACTAGgtttgtttc---------tgttacggaattgatgtacgtgctct--ctattttaaattgtcaattga-atgaatg--cattgtaacgggtgcag------