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AGATGAAAAGCAAGCTGCTGTTGAAAAGGGAGCGCTTGATGCCTCTCGGGATGTAGATTCTAAGGAAATTCATGATCATCTGCAAGAAGGTGAAAACAAGgttggcatttcgttctattttatagttgccttcctattcaccttttcttttgctgattactcttaactcagtctgaaaattatatcttccttctctgtga...
species | Zea mays |
transcript | AC213600.3_FGT002 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ATGTAGATTCTAAGGAAATTCATGATCATCTGCAAGAAGGTGAAAACAAG CATGATGGACATGCAACAGGCCATGATAATCATGTAACAGAAAGCAGGGCAEST: gi|60340820|gb|DN207793.1|DN207793
genomic: ATGTAGATTCTAAGGAAATTCATGATCATCTGCAAGAAGGTGAAAACAAGgttggcattt ... cattgaacagCATGATGGACATGCAACAGGCCATGATAATCATGTAACAGAAAGCAGGGCA
EST: ATGTAGATTCTAAGGAAATTCATGATCATCTGCAAGAAGGTGAAAACAAG CATGATGGACATGCAACAGGCCATGATAATCATGTAACAGAAAGCAGGGCA
genomic: ATGTAGATTCTAAGGAAATTCATGATCATCTGCAAGAAGGTGAAAACAAGgttggcattt ... cattgaacagCATGATGGACATGCAACAGGCCATGATAATCATGTAACAGAAAGCAGGGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGATGAAAAGCAAGCTGCTGTTGAAAAGGGAGCGCTTGATGCCTCTCGGGATGTAGATTCTAAGGAAATTCATGATCATCTGCAAGAAGGTGAAAACAAGgttggcatttcgttctattttatagttgccttcctattcaccttttcttttgctgattactcttaactcagtctgaaaattatatcttccttctctgtga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG