1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GACCAATATTTCGTTTATGGTTGGGAACTCATCCCATGCAAGGCCGACTGACCAGGATGATGAAAACATGAGAGGAGATATTCTCACATTGATCAATGAGgtacacacatttcttacaagttgtaattgaagcagtaattatggctttcttattttctaacatgaatgccagagcaatgcaagaatcatggaaatgtatg...
species | Zea mays |
transcript | GRMZM5G864001_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ACCAGGATGATGAAAACATGAGAGGAGATATTCTCACATTGATCAATGAG GTCTTAGTAAAAAGGAGCTTCAAGATCTCGTGCAGGAGGGCGCAAAGTTGTEST: gi|71311168|gb|DR791894.1|DR791894
genomic: ACCAGGATGATGAAAACATGAGAGGAGATATTCTCACATTGATCAATGAGgtacacacat ... cattgggcagGTCTTAGTAAAAAGGAGCTTCAAGATCTCGTGCAGGAGGGCGCAAAGTTGT
EST: ACCAGGATGATGAAAACATGAGAGGAGATATTCTCACATTGATCAATGAG GTCTTAGTAAAAAGGAGCTTCAAGATCTCGTGCAGGAGGGCGCAAAGTTGT
genomic: ACCAGGATGATGAAAACATGAGAGGAGATATTCTCACATTGATCAATGAGgtacacacat ... cattgggcagGTCTTAGTAAAAAGGAGCTTCAAGATCTCGTGCAGGAGGGCGCAAAGTTGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACCAATATTTCGTTTATGGTTGGGAACTCATCCCATGCAAGGCCGACTGACCAGGATGATGAAAACATGAGAGGAGATATTCTCACATTGATCAATGAGgtacacacatttcttacaagttgtaattgaagcagtaattatggctttcttattttctaacatgaatgccagagcaatgcaagaatcatggaaatgtatg
- - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT