1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GTCACTGGGAAGGCGGTGATGCTTGACGAGATCATCAACTATGTCCAGTCCCTGCAAAGACAAGTCGAGgtaatcagtaacttgtatgttaaaatacgcacaactttgtctcaatcaaggcttagctacgaaccaagtcttcatttggaagagaggaagtagaatcgct...
species | Zea mays |
transcript | GRMZM5G818643_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGCTTGACGAGATCATCAACTATGTCCAGTCTCTGCAAAGACAAGTCGAG TTCTTATCAATGAAGCTCGCAACGGTAAACCCAAGGCTCGACCTCAACATAEST: gi|74233164|gb|DT641078.1|DT641078
genomic: TGCTTGACGAGATCATCAACTATGTCCAGTCCCTGCAAAGACAAGTCGAGgtaatcagta ... catcatgcagTTCTTATCAATGAAGCTCGCAACGGTAAACCCAAGGCTCGACCTCAACATA
EST: TGCTTGACGAGATCTTCAACTATGTCCAGTCCCTGCAAAGACAAGTCGAG TTTTTATCAATGAAGCTCGCAACGGTAAACCCAAGGCTCGACCTCAACATA
genomic: TGCTTGACGAGATCATCAACTATGTCCAGTCCCTGCAAAGACAAGTCGAGgtaatcagta ... catcatgcagTTCTTATCAATGAAGCTCGCAACGGTAAACCCAAGGCTCGACCTCAACATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCACTGGGAAGGCGGTGATGCTTGACGAGATCATCAACTATGTCCAGTCCCTGCAAAGACAAGTCGAGgtaatcagtaacttgtatgttaaaatacgcacaactttgtctcaatcaaggcttagctacgaaccaagtcttcatttggaagagaggaagtagaatcgct
- - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aagtagaa