1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
AAGTTCAGAATACCACAAACGACAACCTTGTGGAAGAGGAAATTTTTTATGTTTCTTCGAGACAAATTGAGATTGCCTGgtaatgtgcatgcatggtgctcatctattttctggtaaaatgaaatggcattgtgctgaatgtaatacctattctacttcttcag
species | Zea mays |
transcript | GRMZM2G515595_T02 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GTGGAAGAGGAAATTTTTTATGTTTCTTCGAGACAAATTGAGATTGCCTG ATATCATTTTGATGGCGCTGTTTTCTCTCAGTATGAAAGCATGGATTATCAEST: gi|32859997|gb|CD999678.1|CD999678
genomic: GTGGAAGAGGAAATTTTTTATGTTTCTTCGAGACAAATTGAGATTGCCTGgtaatgtgca ... acttcttcagATATCATTTTGATGGCGCTGTTTTCTCTCAGTATGAAAGCATGGATTATCA
EST: GTGGAAGAGGAAATTTTTTATGTTTCTTCGAGACAAATTGAGATTGCCTG ATATCATTTTGATGGCGCTGTTTTCTCTCAGTATGAAAGCATGGATTATCA
genomic: GTGGAAGAGGAAATTTTTTATGTTTCTTCGAGACAAATTGAGATTGCCTGgtaatgtgca ... acttcttcagATATCATTTTGATGGCGCTGTTTTCTCTCAGTATGAAAGCATGGATTATCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGTTCAGAATACCACAAACGACAACCTTGTGGAAGAGGAAATTTTTTATGTTTCTTCGAGACAAATTGAGATTGCCTGgtaatgtgcatgcatggtgctcatctattttctggtaaaatgaaatggcattgtgctgaatgtaatacctattctacttcttcag
- - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - AGAGGA