Skip to another splice site:
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGCAGATTTCGGGTTGGCCAAATACCAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgttctgtgatgttggcagggcacacactcaccaattcgcccacatacagcataacctgctgacgcatattctaagactgaatttctgttgtcttttgtttttgtccgcag

Basic information

species Zea mays
transcript GRMZM2G470499_T02
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|29947640|gb|CB816761.1|CB816761
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|148978505|gb|EE026185.2|EE026185
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|78112448|gb|DV530842.1|DV530842
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|149047014|gb|EE048127.2|EE048127
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|148972018|gb|EE022845.2|EE022845
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|148964344|gb|EE015510.2|EE015510
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|149104429|gb|EE289873.2|EE289873
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|148963688|gb|EE014752.2|EE014752
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|71420918|gb|DR805233.1|DR805233
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|148975404|gb|EE025705.2|EE025705
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|71303563|gb|DR787891.1|DR787891
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|37422946|gb|CF649190.1|CF649190
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|94477154|gb|EB706112.1|EB706112
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|88757256|gb|DY541397.1|DY541397
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|91052445|gb|EB162863.1|EB162863
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|71763595|gb|DR961532.1|DR961532
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|86468915|gb|DY235285.1|DY235285
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|149111118|gb|EE294614.2|EE294614
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|71315889|gb|DR794631.1|DR794631
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGGCTC-AGAGTACGCTG
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGG-CTCCAGAGTACGCTG
EST: gi|101401539|gb|EB822449.1|EB822449
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|71316884|gb|DR795129.1|DR795129
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|71315688|gb|DR794465.1|DR794465
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|71430040|gb|DR811090.1|DR811090
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|88750189|gb|DY534330.1|DY534330
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|50330456|gb|CO525582.1|CO525582
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|71758981|gb|DR956918.1|DR956918
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|148952545|gb|EC898375.2|EC898375
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|71436076|gb|DR817126.1|DR817126
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|71311557|gb|DR792145.1|DR792145
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|50331964|gb|CO527090.1|CO527090
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|93284475|gb|EB676739.1|EB676739
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|149095899|gb|EE181560.2|EE181560
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|78090522|gb|DV518896.1|DV518896
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|86467237|gb|DY233607.1|DY233607
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|149205694|gb|ES701290.1|ES701290
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|148967069|gb|EE018230.2|EE018230
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|74233576|gb|DT641490.1|DT641490
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|148959617|gb|EE010908.2|EE010908
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|71306820|gb|DR789567.1|DR789567
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|33466391|gb|CF243440.1|CF243440
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|93017598|gb|EB643118.1|EB643118
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|148950563|gb|EC896143.2|EC896143
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|71303236|gb|DR787720.1|DR787720
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|110215668|gb|EC897566.1|EC897566
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|71300889|gb|DR786474.1|DR786474
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|148972876|gb|EE023878.2|EE023878
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|149012053|gb|EE042471.2|EE042471
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|148935711|gb|EC879754.2|EC879754
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|148963689|gb|EE014753.2|EE014753
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
EST: gi|71430039|gb|DR811089.1|DR811089
EST:     CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGG                         ATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA
genomic: CAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgtt ... ttgtccgcagATATCTGGCTCCAGAGTACGCTGCCACAGGCAAAATTAGCGACCGGTCCGA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTTGCAGATTTCGGGTTGGCCAAATACCAAGCAGCTGAAGTCACCCCTGTTTCTACGCGTGTGATAGGAACCTTCGGgtaaatcgttctgtgatgttggcagggcacacactcaccaattcgcccacatacagcataacctgctgacgcatattctaagactgaatttctgttgtcttttgtttttgtccgcag

- - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - -  CAGCTG
- - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - CTGAAG