1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CTTAATAGCTGATAAAACTGAATTTTCAGCTTTACGTATCTCTGTTATAGATGAACAGCAGCGCTTTGGAGTTGTACAGAGAGGCAGGTTTAACAGTAAGgtaaattgctgagcgtatggtgttcatattgaacgttaactatgcattttcttcctgtatgctattttattctagtactggtgcagaaactgtaattctt...
species | Zea mays |
transcript | GRMZM2G315176_T02 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ATGAACAGCAGCGCTTTGGAGTTGTACAGAGAGGCAGGTTTAACAGTAAG CTATATACNNNNNNNNCAAAGTTGAGTGGNGAAAATACAAGTTCAGACGAGEST: gi|31351705|gb|CD436062.1|CD436062
genomic: ATGAACAGCAGCGCTTTGGAGTTGTACAGAGAGGCAGGTTTAACAGTAAGgtaaattgct ... tttgtcacagCTATATACTTCTTCCTCAAAGTTGAGTGGTGAAAATACAAGTTCAGACGAG
EST: ATGAACAGCAGCGCTTTGGAGTTGTACAGAGAGGCAGGTTTAACAGTAAG CTATATACTTCTTCCTCAAAGTTGAGTGGTGAAAATACAAGTTCAGACGAG
genomic: ATGAACAGCAGCGCTTTGGAGTTGTACAGAGAGGCAGGTTTAACAGTAAGgtaaattgct ... tttgtcacagCTATATACTTCTTCCTCAAAGTTGAGTGGTGAAAATACAAGTTCAGACGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTAATAGCTGATAAAACTGAATTTTCAGCTTTACGTATCTCTGTTATAGATGAACAGCAGCGCTTTGGAGTTGTACAGAGAGGCAGGTTTAACAGTAAGgtaaattgctgagcgtatggtgttcatattgaacgttaactatgcattttcttcctgtatgctattttattctagtactggtgcagaaactgtaattctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG