1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GGACCATGATCCATGGGCCCAAGCCGGAACCAGAGCCGGTGCACGCGCAGAAATGGACGCCTCCGCCTCCGCCTCCAGCGGTTCAAGACAACCACATCATgtaagctactgcttactatcttgtggccacgcgtacggatgcaatgcaacccgatcgaacattgtgatggattggagtgagagtgacacccctgtcgctgtggcgtgcacggccggcggatgcacag
species | Zea mays |
transcript | GRMZM2G301647_T02 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AAATGGACGCCTCCGCCTCCGCCTCCAGCGGTTCAAGACAACCACATCAT GTCGCCGTTCGCGAGGACGACGGGGCACAGCGCCGGGTCGGCGCTGAAGGCEST: gi|76912619|gb|DV164822.1|DV164822
genomic: AAATGGACGCCTCCGCCTCCGCCTCCAGCGGTTCAAGACAACCACATCATgtaagctact ... ggatgcacagGTCGCCGTTCGCGAGGACGACGGGGCACAGCGCCGGGTCGGCGCGGAAGGC
EST: AATGGACGCCTCCGCCTCCGCCTCCAGCGGGTTCA-GACAACCACATCAT GTCGCCGTTCGCGAGGACGACGGGGCACAGCGCCGGGTCGGCGCGGAEST: gi|78076030|gb|DV504464.1|DV504464
genomic: AATGGACGCCTCCGCCTCCGCCTCCAGCGG-TTCAAGACAACCACATCATgtaagctact ... ggatgcacagGTCGCCGTTCGCGAGGACGACGGGGCACAGCGCCGGGTCGGCGCGGA
EST: AAATGGACGCCTCCGCCTCCGCCTCCAGCGGTTCAAGACAACCACATCAT GTCGCCGTTCGCGAGGACGACGGGGCACAGCGCCGGGTCGGCGCGGAAGGCEST: gi|93281827|gb|EB674091.1|EB674091
genomic: AAATGGACGCCTCCGCCTCCGCCTCCAGCGGTTCAAGACAACCACATCATgtaagctact ... ggatgcacagGTCGCCGTTCGCGAGGACGACGGGGCACAGCGCCGGGTCGGCGCGGAAGGC
EST: AAATGGACGCCTCCGCCTCCGCCTCCAGCGGTTCAAGACAACCACATCAT GTCGCCGTTCGCGAGGACGACGGGGCACAGCGCCGGGTCGGCGCGGAAGGCEST: gi|160481517|gb|EY254349.1|EY254349
genomic: AAATGGACGCCTCCGCCTCCGCCTCCAGCGGTTCAAGACAACCACATCATgtaagctact ... ggatgcacagGTCGCCGTTCGCGAGGACGACGGGGCACAGCGCCGGGTCGGCGCGGAAGGC
EST: AAATGGACGCCTCCGCCTCCGCCTCCAGCGGTTCAAGACAACCACATCAT GTCGCCGTTCGCGAGGACGACGGGGCACAGCGCCGGGTCGGCGCGGAAGGCEST: gi|89761195|gb|DY689309.1|DY689309
genomic: AAATGGACGCCTCCGCCTCCGCCTCCAGCGGTTCAAGACAACCACATCATgtaagctact ... ggatgcacagGTCGCCGTTCGCGAGGACGACGGGGCACAGCGCCGGGTCGGCGCGGAAGGC
EST: AAATGGACGCCTCCGCCTCCGCCTCCAGCGGTTCAAGACAACCACATCAT GTCGCCGTTCG
genomic: AAATGGACGCCTCCGCCTCCGCCTCCAGCGGTTCAAGACAACCACATCATgtaagctact ... ggatgcacagGTCGCCGTTCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGACCATGATCCATGGGCCCAAGCCGGAACCAGAGCCGGTGCACGCGCAGAAATGGACGCCTCCGCCTCCGCCTCCAGCGGTTCAAGACAACCACATCATgtaagctactgcttactatcttgtggccacgcgtacggatgcaatgcaacccgatcgaacattgtgatggattggagtgagagtgacacccctgtcgctgtggcgtgcacggccggcggatgcacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - -CGCCTCCG