1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATGCGTGTCGGGGCCATCGAGCGATCCGGCGAGCGGGTGCTGGTCATCGACGACCTGGTTGCGACCGGAGGGACACTCTGTGCTGCGATCAGGCTTCTAGgtacgtgagcggctcggtttcaactctactactactatgcattcaaattcaaacgaagtagtatccagtactgctgcttgcgttggaactgcatgtgcca...
species | Zea mays |
transcript | GRMZM2G179810_T03 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CCACTTGGTTGCGACCGGAGGGACACTCTGTGCTGCGATCAGGCTTCTAG AACGTGCTGGAGCCGATGTGGTCGAGTGCGCGTGTGTCATTGGGCTCCCGAEST: gi|6527132|gb|AW216342.1|AW216342
genomic: CGACCTGGTTGCGACCGGAGGGACACTCTGTGCTGCGATCAGGCTTCTAGgtacgtgagc ... tgctttccagAACGTGCTGGAGCCGATGTGGTCGAGTGCGCGTGTGTCATTGGGCTCCCGA
EST: CGACCTGGTTGCGACCGGAGGGACACTCTGTGCTGCGATCAGGCTTCTAG AACGTGCTGGAGCCGATGTGGTCGAGTGCGCGTGTGTCATTGGGCTCCCGAEST: gi|30088016|gb|CB886221.1|CB886221
genomic: CGACCTGGTTGCGACCGGAGGGACACTCTGTGCTGCGATCAGGCTTCTAGgtacgtgagc ... tgctttccagAACGTGCTGGAGCCGATGTGGTCGAGTGCGCGTGTGTCATTGGGCTCCCGA
EST: CGACCTGGTTGCGACCGGAGGGACACTCTGTGCTGCGATCAGGCTTCTAG AACGTGCTGGAGCCGATGTGGTCGAGTGCGCGTGTGTCATTGGGCTCCCGAEST: gi|101394573|gb|EB819221.1|EB819221
genomic: CGACCTGGTTGCGACCGGAGGGACACTCTGTGCTGCGATCAGGCTTCTAGgtacgtgagc ... tgctttccagAACGTGCTGGAGCCGATGTGGTCGAGTGCGCGTGTGTCATTGGGCTCCCGA
EST: CGACCTGGTTGCGACCGGAGGGACACTCTGTGCTGCGATCAGGCTTCTAG AACGTGCTGGAGCCGATGTGGTCGAGTGCGCGTGTGTCATTGGGCTCCCGAEST: gi|60351100|gb|DN218073.1|DN218073
genomic: CGACCTGGTTGCGACCGGAGGGACACTCTGTGCTGCGATCAGGCTTCTAGgtacgtgagc ... tgctttccagAACGTGCTGGAGCCGATGTGGTCGAGTGCGCGTGTGTCATTGGGCTCCCGA
EST: CGACCTGGTTGCGACCGGAGGGACACTCTGTGCTGCGATCAGGCTTCTAG AACGTGCTGGAGCCGATGTGGTCGAGTGCGCGTGTGTCATTGGGCTCCCGAEST: gi|211542408|gb|FL173494.1|FL173494
genomic: CGACCTGGTTGCGACCGGAGGGACACTCTGTGCTGCGATCAGGCTTCTAGgtacgtgagc ... tgctttccagAACGTGCTGGAGCCGATGTGGTCGAGTGCGCGTGTGTCATTGGGCTCCCGA
EST: CGACCTGGTTGCGACCGGAGG-ACACTCTGTGCTGCGATCAGGCTTCTAG AACGTGCTGGAGCCGATGTGGTCGAGTGCGCGTGTGTCATCGGGCTCCCGA
genomic: CGACCTGGTTGCGACCGGAGGGACACTCTGTGCTGCGATCAGGCTTCTAGgtacgtgagc ... tgctttccagAACGTGCTGGAGCCGATGTGGTCGAGTGCGCGTGTGTCATTGGGCTCCCGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGCGTGTCGGGGCCATCGAGCGATCCGGCGAGCGGGTGCTGGTCATCGACGACCTGGTTGCGACCGGAGGGACACTCTGTGCTGCGATCAGGCTTCTAGgtacgtgagcggctcggtttcaactctactactactatgcattcaaattcaaacgaagtagtatccagtactgctgcttgcgttggaactgcatgtgcca
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