1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TGGAAAGGGAGGATGAATGCGGGATTTGCATGGAGGCATGCACCAAGATGGTCCTGCCTAATTGCAGTCATGCAATGTGCATAAAGTGCTATAGGGACTGgtaattacctctcacaattttcattatctgtatgtgaatttgaacaggctatgcaatttggatatggatttcgagtctaattaaagtgctacattttagt...
species | Zea mays |
transcript | GRMZM2G171967_T01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GTCCTGCCTAATTGCAGTCATGCAATGTGCATAAAGTGCTATAGGGACTG GTATAAGAGATCAGAGTCTTGCCCTTTCTGCCGAGGAAGCCTCAAAAGAATEST: gi|78076532|gb|DV504966.1|DV504966
genomic: GTCCTGCCTAATTGCAGTCATGCAATGTGCATAAAGTGCTATAGGGACTGgtaattacct ... gttggtacagGTATAAGAGATCAGAGTCTTGCCCTTTCTGCCGAGGAAGCCTCAAAAGAAT
EST: GTCCTGCCTAATTGCAGTCATGCAATGTGCATAAAGTGCTATAGGGACTG GTATAAGAGATCAGAGTCTTGCCCTTTCTGCCGAGGAAGCCTCAAAAGAAT
genomic: GTCCTGCCTAATTGCAGTCATGCAATGTGCATAAAGTGCTATAGGGACTGgtaattacct ... gttggtacagGTATAAGAGATCAGAGTCTTGCCCTTTCTGCCGAGGAAGCCTCAAAAGAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGAAAGGGAGGATGAATGCGGGATTTGCATGGAGGCATGCACCAAGATGGTCCTGCCTAATTGCAGTCATGCAATGTGCATAAAGTGCTATAGGGACTGgtaattacctctcacaattttcattatctgtatgtgaatttgaacaggctatgcaatttggatatggatttcgagtctaattaaagtgctacattttagt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cctctcac